| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1565 |
|---|
| Symbol | |
|---|
| ID | 5453963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1703564 |
|---|
| End bp | 1704655 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640877138 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001412841 |
|---|
| Protein GI | 154252017 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.461626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTT TGAAGGGCGT TGGGATACTC ACGGCGGCGC TGCTTCTCAT CATGCTGGTG
AGTTTCTGGG CCGCCGGCCG CGCCCGGCCG ATCCTCGACG AAGCAGCCCG CTCCTCTCTC
GCCGCCAAGG GCCTGGCTTA CAGCTTCATC GAAACCGCCG ACGGCACCGT GCATTACCGG
CTGGAAGGCC CTGAGGACGC ACCGCTGGTC GTGCTTGTCC ACGGCTTCTC GACCCCCTCT
TTCGTCTGGG ACAACTATTT CAAACCGCTG ACGGAAAGCG GCTACCGCGT GCTCGCCTAT
GACAATTTCG GCCGCGGCCT CTCAGACCGC CCCCGCGCGG TCTATGATGC CGAGCTTCTG
GACCGGCAAC TCGTGAACCT GCTTGACGCA TTGAAGGTCG ACAGGCGCAT CGATCTCGTC
GGCTATTCGA TGGGCGGCGC CATCGCCACC ATATTCACTG CCCGCCACAC GGAACGCGTG
CGCTCCTTGA CGCTGATAGC GCCCGCAGGC CTCGGCGTTG CGATGGATGA CAATGTGGAA
CTGCTGAAGC GGCCGCTGCT GGGAGACTGG ATCGTCCGGC TTTTCGGCAC GCGCCTGTTC
TACAGCGCCG CCGCACAGGA AGCCAAAAGC GCGCCGAACC CCGGCGCCTT CCTGGAAGGC
TTCAACCGGC AACTGGAATA TCGCGGCTAT GGCGATGCGT TGCTGTCGAC CATGCGGCAT
TATCCCCTGG CAGCTTCGGA AGCTTCCTTC GCGAAAGTCG GCCGCTCGGC AGTGCCCGTT
CTGGTGATCT GGGGTGAAGC CGATGAAATC GTGCCGTATG AATATTCGAC AAGGCTGATG
GAACTCATGC CGGAGGCACA GCTTCGGTCC TATCCCGCCG CCGGGCATAA CATCACCTTC
GCGCAGCCTG AACTTGTCAG CGGGCTTCTG CTGGATTTCC TGCGCGTGCA GGACATGAAG
GTGACATCGG CAGGCGCCGG CGGAAAACCG AGAGGGCCGC TCGCCCGGCT CGAACCGCGA
AAATGCGGAA GCTGCTCCAA GGATTCCGCA GATACCGCAG GCGACATGAC CATCGAGCCG
CCTTCGAACT GA
|
|---|
| Protein sequence | MAILKGVGIL TAALLLIMLV SFWAAGRARP ILDEAARSSL AAKGLAYSFI ETADGTVHYR
LEGPEDAPLV VLVHGFSTPS FVWDNYFKPL TESGYRVLAY DNFGRGLSDR PRAVYDAELL
DRQLVNLLDA LKVDRRIDLV GYSMGGAIAT IFTARHTERV RSLTLIAPAG LGVAMDDNVE
LLKRPLLGDW IVRLFGTRLF YSAAAQEAKS APNPGAFLEG FNRQLEYRGY GDALLSTMRH
YPLAASEASF AKVGRSAVPV LVIWGEADEI VPYEYSTRLM ELMPEAQLRS YPAAGHNITF
AQPELVSGLL LDFLRVQDMK VTSAGAGGKP RGPLARLEPR KCGSCSKDSA DTAGDMTIEP
PSN
|
|---|
| |