| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1560 |
|---|
| Symbol | |
|---|
| ID | 5456158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1699092 |
|---|
| End bp | 1700183 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640877133 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001412836 |
|---|
| Protein GI | 154252012 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA CCAACGCTGC GGCGCATTTC TCACAGAGCT ATGCGGAGGC GCGGCGGCGA
TTTTTGGCGG CGGCGGAGGC GGCGGGGGCG CGCGTTAACC ATCACGAACA TCCGATGGCG
GGACCGGACG GGGAAAAGCT GGCGACGGAT GTGGCGCGGC TGGGGCCGGA TGATGCGAGA
TTTGTTCTCG GGATCGGTTC GGGGACGCAT GGCGTCGAAG GCTATTGCGG CTCAGGCGTA
CAGACGGCGC TCTTGAGCGA GGGCTTCGGA CGCAACCTGC CGCCGGACAC GGCCATCATC
TTCATCCATG CGATCAACCC TTACGGCTTT GCATGGAATC GGCGGGTGAA CGAGGACAAT
GTCGACCTCA ACCGCAACTT CCTCGATCAC TCCAAACCGC ATCCGGAAAA CCCCGGCTAC
GAGGAACTGG CAAGCGCGAT CAACCCGCCC GACCTGTCGC CGGAAACGAT GGCTGAAAGC
CGGGACAAAA TGAAAGCCTA TGCCGAGAAG CACGGACACC CGGCGATGCA GCACGCGCTG
AGCGCCGGCC AGTATACGCA TGCCGACGGA GTGCAGTTCG GCGGGCGCGA ACCGGTCTGG
TCGAACCGCA CGCTGAGGAA GATCATCCGC GAGGAAATGG GCGCGGCGGA GCGCGTGATA
TTCGTGGATA TCCATACCGG CCTCGGCGCG CGCGGCGCCG GTGAGATGAT CTGCACGGAC
CCCGAAACGG CGGACACTTT CAAACGGATG AAAGCCTGGT GGGGACCGAT CGTCCGCTCG
ACGGTGGGCG GCGGCTCCGT CTCTTCCGAT GTGCCGGGCT CGATCCCCGT CTGCTTTGCC
GAGGAGCTCG CCGGGCGCGA AGTGACGTCG GGCGGCCTCG AATTCGGAAC GGTGCCGATC
CGCGAAGTGA CGGTGGCGCT GCAATCCGAC AACTGGCTGC ACCAGAATGG CGGCCACAAG
AACCCGAAAG CAGCGGAAAT CGCGAAGAAG ACCCGCGACG CCTTCTATGT CGATGAGGCC
GACTGGAAGG ACATGGTGAC AGCGCAGTCG CGCGATGTCT GCGCGGCGGC GCTGAAGGCG
CTCGAAGCCT GA
|
|---|
| Protein sequence | MSMTNAAAHF SQSYAEARRR FLAAAEAAGA RVNHHEHPMA GPDGEKLATD VARLGPDDAR
FVLGIGSGTH GVEGYCGSGV QTALLSEGFG RNLPPDTAII FIHAINPYGF AWNRRVNEDN
VDLNRNFLDH SKPHPENPGY EELASAINPP DLSPETMAES RDKMKAYAEK HGHPAMQHAL
SAGQYTHADG VQFGGREPVW SNRTLRKIIR EEMGAAERVI FVDIHTGLGA RGAGEMICTD
PETADTFKRM KAWWGPIVRS TVGGGSVSSD VPGSIPVCFA EELAGREVTS GGLEFGTVPI
REVTVALQSD NWLHQNGGHK NPKAAEIAKK TRDAFYVDEA DWKDMVTAQS RDVCAAALKA
LEA
|
|---|
| |