| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1534 |
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| Symbol | |
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| ID | 5454983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1670398 |
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| End bp | 1672761 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877107 |
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| Product | RND superfamily exporter |
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| Protein accession | YP_001412810 |
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| Protein GI | 154251986 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0360223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGCGTA TTGAAAATCT GGTGTTCGGC CTGCGTGCCG TCATTCTAGT GGCACTGTTG
GCGTTCACGG TCGTGATGGG CATCTTCGCA TCCCAACTGC GGATGGATGC CGGCTTCACG
AAGATGCTTC CTATCGGCCA TCCCTACATC GAAACCTTCA CCGAGTATTC CGAGAGCTTC
GGCGGCGGCA ACCGCGTGCT GGTGGTGCTG GAGAACAAGG AAGGCGATAT CTTCGAGAAG
GACTTCCTCT ATACGCTGAA CGATGCGACC CAGGATCTCT TCTATATTCC CGGTGTCGCG
CGCCACACGG TCACCTCGCT CTGGACGCCG AACACGCGCT TCATCGCCGT TACGGAAGAA
GGTCTTGAAG CCGGCGACGT GATCCCGGCC AATTTCGCCG GTACGGACGA AGACATCGAT
ACGGTTCTGC AGAACACGCT GCGCGCCGAC CTCGTCGGAC GTCTCGTTTC CAACGATTTC
AGTTCGTCGA TGATCCGCGC CGAACTTCTC GACTTCAATC CGGAGACGCA AGAGCGCCTC
GATTATTTCG ACGTGGCGCG CAAGCTCGAA ACCGATCTTC GCGACAAATA TGTCTCGGAC
AAGGTCGATG TGAAGATCGT CGGTTTTGCG AAACTTGTTG GCGACATCGC GGACGGCGCT
TCCTCCGTCG TCACCTTCTT CTCGGTGGCC TTCTTCCTCA CCGCCTTCAT GCTCTGGCTC
TATTGCCGCT CATGGGTCCT GACGGCGGTC ACGGTCGGCG CCTCGCTCTG CTCGGTCGTC
TGGCAGTTCG GCCTGCTTCA TATTCTCGGC TTCGGCCTCG ACCCGCTCGG CGTGCTCGTG
CCGTTCCTCG TCTTCGCCAT TGGCGTCAGC CACGGCGTGC AGCAGATCAA CATGGTCGGC
GCGGAGATGG CCGCCGGTCT CAACAAGAAC GAGGCCGCGC GCGCGACCTT CACCTTCCTG
CTGCGTCCGG GCCTCGTGGC ACTTCTGACC ACGCTGGCTG GCTTTGCGAC GCTCTACATC
ATTCCGATCG GCATGATCCA GGAACTCGCG ATCACGGCGT CGATCGGTAT CGGGTTCAAG
ATCATCTCGA ACCTCATCAT GCTGCCGCTG CTGGTGTCCT ATGTGGCGCC GCCGGAAGAG
GAGTATGGTG CGAAGGTTCG TCGCGCCATG GAGACCCGTG CCAAGCTCTG GCCGGCCCTC
TCCCGGATCG CGACACCGCC GATCGCCTTT CCGTTCGTCA TCATCTGCTT CATCGTCGGC
TGCATCGGCT TCTACGAGGC CCGCGACAAG CAGATCGGCG ACGTCCATGC GGGTGCGGGC
GAGTTGTGGC CGGATGCGCG CTACAATCAG GACAGCCGCT ATATCGCCGA GAAGTTCAAC
CTCGGTCTCA ACGTGCTGAC CGTGATCGTC GAATCGGAAG ATGTCGTCTG CGTCGATTAC
GGCAAGATGC ATTATCTCGA GAGCTTCAGC TGGCACATGC GTAATGTGGA TGGCGTGCAG
TCGGTCATCA GCCTTCCGAT CCTCGCGCGC AAGATCAACA GCATGTGGCA GGAGGGCAAT
CCGAAGTGGC AGAACCTGCC GCGCAATCCG GCCGCTCTCG CCCAGGCGAC CTCCAGCATC
GGAAGCTCGT CTGGCATCGT GAACGCCGAC TGCTCCACAG CCGCCGTCGC CATCTTCATC
GCGGATACGA AGGCCGGCAC AGTCAAGCAC GTCGTCAACG AACTCGAAGC GTGGATGGCT
GCCCCTGAAA ACAAATACGA GGGCATCAAC CTTCGCGTCG GTACGGGCAA CGTCCCGATC
GTCGCCGCCA CCAACGAAAT CGTGCATAAG TCCGAGCTGC CCATGCTGCT CTATGTGTAC
GCGGTGGTCA TGACGCTCGT CATTCTCACC TATCGCGAAT GGCGCGGTGC GCTTTGCTGC
GTGTTGCCGC TCATCCTGTC GACCATTATC GGCGACTGGT TCCTGACGGC GGCGGGCATC
GGACTCAAGA TATCGACGCT CCCGGTTCTC GCCATCGCGG TCGGTATCGG TGTCGACTAT
GGCATCTACG AGTACAACCG TATGCAGCGC TATATGCGCA TGGGCAAGAA CCCGCATGAG
GCGTATCTCC AGGCGCTCTA CGACGTGGGT TCGGCAACCA TGTTCACGGG CGGCACACTT
GCTATCGGCG TCAGCACCTG GGCGTTCTCG GCGCTCAAGT TCCAGGCCGA TATGGGCCTG
CTCCTCACCT TCATGTTCAT GGTCAACATG ATCGGTGCGG TGACGTTGCT GCCGGCGCTG
GTTGCGGTCT TCGAGTATAT CTGGCCGCTG AAGCGCGAGC CGCTTTCCGA AGAGGAAGCG
CGTGCGGTGA TGCGCGGGCA CTGA
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| Protein sequence | MQRIENLVFG LRAVILVALL AFTVVMGIFA SQLRMDAGFT KMLPIGHPYI ETFTEYSESF
GGGNRVLVVL ENKEGDIFEK DFLYTLNDAT QDLFYIPGVA RHTVTSLWTP NTRFIAVTEE
GLEAGDVIPA NFAGTDEDID TVLQNTLRAD LVGRLVSNDF SSSMIRAELL DFNPETQERL
DYFDVARKLE TDLRDKYVSD KVDVKIVGFA KLVGDIADGA SSVVTFFSVA FFLTAFMLWL
YCRSWVLTAV TVGASLCSVV WQFGLLHILG FGLDPLGVLV PFLVFAIGVS HGVQQINMVG
AEMAAGLNKN EAARATFTFL LRPGLVALLT TLAGFATLYI IPIGMIQELA ITASIGIGFK
IISNLIMLPL LVSYVAPPEE EYGAKVRRAM ETRAKLWPAL SRIATPPIAF PFVIICFIVG
CIGFYEARDK QIGDVHAGAG ELWPDARYNQ DSRYIAEKFN LGLNVLTVIV ESEDVVCVDY
GKMHYLESFS WHMRNVDGVQ SVISLPILAR KINSMWQEGN PKWQNLPRNP AALAQATSSI
GSSSGIVNAD CSTAAVAIFI ADTKAGTVKH VVNELEAWMA APENKYEGIN LRVGTGNVPI
VAATNEIVHK SELPMLLYVY AVVMTLVILT YREWRGALCC VLPLILSTII GDWFLTAAGI
GLKISTLPVL AIAVGIGVDY GIYEYNRMQR YMRMGKNPHE AYLQALYDVG SATMFTGGTL
AIGVSTWAFS ALKFQADMGL LLTFMFMVNM IGAVTLLPAL VAVFEYIWPL KREPLSEEEA
RAVMRGH
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