Gene Plav_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1507 
Symbol 
ID5454041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand+ 
Start bp1640098 
End bp1640772 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID640877080 
ProductTetR family transcriptional regulator 
Protein accessionYP_001412783 
Protein GI154251959 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0289697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG TTACATGTTG CATTCTATTG AGCCGTTGCG TAAGAACTGA TCCCATGGAT 
ACCGCCGAAC CCAGCCAGCG CGATCGCATC CTGCAGGCCG CAACCGACCT GATCCGCCGC 
TTTGGCGAAG CGAAGACAAA CGTGGTGGAT ATCGCCCAGG CCATGGGTCT GTCGCATTCG 
GCGATCTACC GGCATTTCCG GTCCAAGGCC GAAATTTTCG ATGCGTTGGC TGAAGCGACG 
ATGGCCGAGG AGGCGGTGCT TGCCGAAACC TTCGTCGAGG CCGATGGACC TGCTTCCGCC 
CGCCTGTTGG CGCTGGTTCT CGCACTCCAC CAGAGCAAGT GTCGGAAATA CGCTCAGGAC 
GCCGAGATGC ACGCGCTCTA CCGGCGCATC CTGGAAGAGC GCCCCGACCT CGTTCTCGAT 
TACGCGCAGA GGATGACGGG CCTCGTCCGC AGGATCATTG CCGACGGCGT GGAAAGGCGC 
GAGTTCGTCG TCGACGATCC GGATATTGCG GCAGGGGTCG TGCGCGACGC CGTTACCGTT 
TTCGTCCACC CGGCCCATGT CGAAGCTGCG GCGAAGGCGG GCATCGACAT GGAATCCGGG 
CTGAGGAACT TGATGAAGGT GATCCTGCGC GGCCTGTCGT CAAGCTGGCC TGAGGAGCGT 
GCGGCGCCGC GTTGA
 
Protein sequence
MKYVTCCILL SRCVRTDPMD TAEPSQRDRI LQAATDLIRR FGEAKTNVVD IAQAMGLSHS 
AIYRHFRSKA EIFDALAEAT MAEEAVLAET FVEADGPASA RLLALVLALH QSKCRKYAQD 
AEMHALYRRI LEERPDLVLD YAQRMTGLVR RIIADGVERR EFVVDDPDIA AGVVRDAVTV 
FVHPAHVEAA AKAGIDMESG LRNLMKVILR GLSSSWPEER AAPR