| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1506 |
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| Symbol | |
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| ID | 5454972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1638939 |
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| End bp | 1640033 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877079 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_001412782 |
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| Protein GI | 154251958 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.185126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTG AGCAAACAGT CCCGCACCGG ATCGCCCTGG TGACCGGCGG ATCAGGCTTC
GTCGGGGGGC ACCTCATTTC CCGGCTGATC TCCGAGGGTT GGCGGGTCCG TGCCATCGGC
CGGTCGGCCC AAAGCCTCGC CGCCGTCGAG GCACTTGGGG CCGAACCGAA AGAGGCCGAC
CTCACCGATA AAGCGGCGCT TGCGCGGGCC ATGGATGGGG TGGACACGGT CTTTCACGTC
GCCGCCCATT TCAAACTCTG GGGACCAAAG CGAGTGTTCC GCGCGATCAA TGTCGGTGGC
GCGCGCAACG TGATCGCCGC GGCCGAACGC GCAGGTGTCC GCCGGGTCGT CTATGTCAGC
GCCGCCGCCG TCGTCATGGG ACGCCCGGAG CCGCAAATGC AGGCGACCGA AGATCTTCCG
CTGCACCGCA TGCGGTTTGC CCCCTACTCG GCAACCAAGG CCGCAGCCGA GAAGATCGTG
CTTGCCGCCA ACGGACGCCG CGAAGGCTTT ACGACGGTGG CAATCCGCCC GCCTTTTATC
TGGGGCCCCG ACATGCCGGC GCTCGACCAC ATGGTCGAGA CAGTGAAGGC CGGCCAGTTC
CAATGGGTGG CGGGCGGCAG TCAGGCGATG TCCACATGTC ATGTGGAGAA TCTCTGCCAT
GCCGTGATTC TCGCCGCCGA TCACGGCAAG GGAGGTCAGG CCTATTTCGT TTCGGACGAC
GCGGATACGA CGCTCAAGGC GTTCCTCTCG CACCTCCTGG CCAGCCGCGG CGTCGAGCCC
GGGGACCGCA CCGTTGCTTT CGGTCTGGCC TGGACGATGG CCGGTATCAT GGGAGCCGTC
TGGCGCCTCT TCCGCCTGAG AGGCGAGCCC CCCATCACAC GGCAGATGCT GCGCCTGATC
GGCAAGGACT TTACGCTCAA TATCGCGCGC GCCCGCAGCG AACTCGGATA TGCCCCTGGT
GACCGCGGAA GAAGGGCTCG CGGCGATGCA ACCGACGGGA TGACGGATGC CGCATCCTTC
GACGCGCCGG AACCGGGGCC GCCGCTCACG TCATCGTGGA GATCGTGGAG CGGAAGCGGG
CGAGCGCATA GCTGA
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| Protein sequence | MTSEQTVPHR IALVTGGSGF VGGHLISRLI SEGWRVRAIG RSAQSLAAVE ALGAEPKEAD
LTDKAALARA MDGVDTVFHV AAHFKLWGPK RVFRAINVGG ARNVIAAAER AGVRRVVYVS
AAAVVMGRPE PQMQATEDLP LHRMRFAPYS ATKAAAEKIV LAANGRREGF TTVAIRPPFI
WGPDMPALDH MVETVKAGQF QWVAGGSQAM STCHVENLCH AVILAADHGK GGQAYFVSDD
ADTTLKAFLS HLLASRGVEP GDRTVAFGLA WTMAGIMGAV WRLFRLRGEP PITRQMLRLI
GKDFTLNIAR ARSELGYAPG DRGRRARGDA TDGMTDAASF DAPEPGPPLT SSWRSWSGSG
RAHS
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