| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1460 |
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| Symbol | |
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| ID | 5453986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1591395 |
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| End bp | 1593590 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877033 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001412737 |
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| Protein GI | 154251913 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG AAATATCCAC AGGCACGGCG CCGGGCTGGA CAAGCGTCAG CGTTCTCATT
CCCCTCGCCC TGCCAAAGCC TTACGACTAC AAGGTCCCCG CCGGCATGAC CGTGCGGCCG
GGGGATTATG TCATTGTGCC GCTCGGGCCG CAGGAGCTTC TGGGCGTCGT CTGGGGCGAG
GGCACGGGCG AGGTCGGCCA TAACAGGCTG AAATCCATCA TCGAGGTGCT GGATGCGCCG
CCGATGCCGG AGGTCTCGCG CCGCTTTGTC GACTGGGTGG CGGGTTACAC GCTTTCACCG
GCAGGCTCGG TCCTGCGTTT AACCATTCGC GCGCCCGGCG CGCTGGAGCC GCAGCGGATG
CGGACGGCCT ACCGCCTCTG CGACAGGCGC CCCCCTCGCA TGACACCCGC CCGCCTCCGC
GTCGTCGAAA CGGCGTCCGA TGGCTTCGCG CGCAGCGTGC GCGAGCTCGC GGAAGAAGCG
GGCGTATCGG ATGGCGTGGT GCGCGGGCTT GTCGATGCGG GCACGCTGCA GCCGGTCGAC
CTGCCGACCG AATTGCCGTT CGATGCGCCG CAGCCGAATG CGAGCGGCAT CGACCTCTCG
CCGCAACAGG CAGAAGCCGC CGCGCTTCTC ACGGCCCATG TCGAGGCGGA GCGTTTCGCC
GCCGTGCTGC TCGATGGCAT AACGGGCTCC GGCAAGACGG AAGTCTATTT CGAGGCGGTG
GCCGCCGCGC TCCGCCGCGG CAAGCAGGTC TTGATCCTGC TGCCGGAAAT TGCGCTCACC
AGCCAGTTCC TCGAACGCTT CGAGCGCCGT TTCGGCTGCC GTCCGGCGGA GTGGCATTCG
GATGTGCCGT CCCGCGAGCG CCGCCGTGTC TGGCGCGCGG TCGCGGAGGG CAGCGTCTCC
GTCGTGGTCG GCGCGCGCTC GGCACTCTTT CTTCCCTTTC CCGATCTCGG CCTCATCGTT
GTCGACGAAG AACATGACGC CGCCTTCAAG CAGGAAGACG GCGTCGCTTA CCATGCGCGC
GACATGGCGG TGGTGCGTGC CTCGCTCGGC CAGTTTCCCG TCATCTTGAG TTCGGCGACG
CCCTCGCTCG AAACGGCGGT CAATGTCGAG CAGGGGCGCT ATGCCTCGGT GCGTCTCGAT
GCGCGTTTCG GCGCGGCCGA GCTGCCGGAT GTCAGTGCCA TCGACATGCG TCTTCATCCG
CCGGAGCGCG GGGCCTGGCT CTCGCCGCTC CTCGTCACGG AAATTGCGCG CGCGCTCGAG
GCGGGCGAAC AGGCGATGCT CTTTCTCAAC AGGCGCGGCT ATGCCCCGCT CACGCTTTGC
CGTACCTGCG GTCATCGCAT CGAATGTCCG CAATGTTCGG CCTGGCTCGT CGAGCATCGC
TTCCGCCGTG AGCTTGCCTG TCATCATTGC GGTTATAGCG CGCCGGTGCC GAAGGCGTGC
CCTTCTTGCG GCGCGGAAGA TACGCTGGTT GCCTGCGGGC CGGGCGTCGA GCGCATCGCG
GAAGAAGTCG CGACGCTTTT CCCCGAAGCG CGTGTCGCTG TGGTCTCCTC GGATAATCTG
CGCGGCCCCG CGGCGCATGA AGCCGTCTTC GCCGCCATCG AAAATCGCGA GGTCGATATC
GTCATCGGCA CGCAGATCGT CGCCAAGGGC CATCACTTTC CCTGGCTCAC CGTTGTCGGC
GTGGTCGATG CCGATCTCGG ATTGGAGAAT GGCGACCTGC GCGCGGGCGA GCGCACCTTC
CAGTTGCTGC AGCAGGTGGC GGGCAGGGCA GGGCGCGCCG AGCGTCCGGG CCGCGTCTTC
CTGCAATCAT GGATGCCGGA ACACAATGTC ATGCGCGCGC TTGTCTCCGG GCGGCGCGAT
GAGTTCCTCG TCCGCGAGGC GGCGGCGCGC GAGCGTGTCT CGCTGCCGCC TTATGGCCGC
CTTGTCGGCG TCGTCATCTC CTCGCCCGAT GCCGAGCTTG CGCGAAAGGT CGCGCGCGAG
ATGTCGCGGC GTGCTCCGCA GGCGGACAAT GTTTCGGTGC TCGGCCCCGC GCCCGCGCCT
ATGGCGCTGC TCAGGGGCCG CACGCGGCTC CGCTTCCTCG TCAAGGCGGG GCGCAACGTC
AATGTGCAGT CCTATATGCA GGCCTGGCTC GCCGACATGA AAATCCCGAA CGCGGTGCGC
GTCTCGGTCG ATATCGATCC CTACAGCTTC ATGTAG
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| Protein sequence | MASEISTGTA PGWTSVSVLI PLALPKPYDY KVPAGMTVRP GDYVIVPLGP QELLGVVWGE
GTGEVGHNRL KSIIEVLDAP PMPEVSRRFV DWVAGYTLSP AGSVLRLTIR APGALEPQRM
RTAYRLCDRR PPRMTPARLR VVETASDGFA RSVRELAEEA GVSDGVVRGL VDAGTLQPVD
LPTELPFDAP QPNASGIDLS PQQAEAAALL TAHVEAERFA AVLLDGITGS GKTEVYFEAV
AAALRRGKQV LILLPEIALT SQFLERFERR FGCRPAEWHS DVPSRERRRV WRAVAEGSVS
VVVGARSALF LPFPDLGLIV VDEEHDAAFK QEDGVAYHAR DMAVVRASLG QFPVILSSAT
PSLETAVNVE QGRYASVRLD ARFGAAELPD VSAIDMRLHP PERGAWLSPL LVTEIARALE
AGEQAMLFLN RRGYAPLTLC RTCGHRIECP QCSAWLVEHR FRRELACHHC GYSAPVPKAC
PSCGAEDTLV ACGPGVERIA EEVATLFPEA RVAVVSSDNL RGPAAHEAVF AAIENREVDI
VIGTQIVAKG HHFPWLTVVG VVDADLGLEN GDLRAGERTF QLLQQVAGRA GRAERPGRVF
LQSWMPEHNV MRALVSGRRD EFLVREAAAR ERVSLPPYGR LVGVVISSPD AELARKVARE
MSRRAPQADN VSVLGPAPAP MALLRGRTRL RFLVKAGRNV NVQSYMQAWL ADMKIPNAVR
VSVDIDPYSF M
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