Gene Plav_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1428 
Symbol 
ID5456736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1560682 
End bp1561578 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content64% 
IMG OID640877001 
ProductCitryl-CoA lyase 
Protein accessionYP_001412705 
Protein GI154251881 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC TTGCCGCCCG CCCGCGCCGC AGCGTTCTCT ATATGCCCGG CTCGAATGGC 
CGCGCGCTCG AAAAAGCGAG GGAAATTCCG GCCGACGCGC TGATCCTCGA CCTTGAAGAC
GCGGTCGCGC CCGATGCCAA GGAAGAAGCG CGCAACCAGG TCTGCGCGGC GGTCAAGCTT
GGCGGTTATG GCAAGCGTGA GATCATCATC CGCGTAAACG CGCTCGATAC GCCCTGGGGG
CTCGACGACA TCAAGGCCGC CGTCGCCGCG GGGCCGGATG CGATCCTTGT TCCGAAAATC
AATTCCGCCG CCGATGTCGA ACGCGCCGAA AATGCGCTCT CGGATGCGGG CGCGCTCGGC
CGCGTCCAGC TCTGGTGCAT GATCGAGACA CCGCTCGCCA TGCTCAACAT CCAGTCGATC
GCGCAGAAGG CGCGCGAGCC GGGCTCCCGC ATGTGCGTCT GGGTCATGGG CACGAACGAC
ATCGCGAAGG AGCTTCGCGC CGCGCATACG CCGGACCGCG TGCCCATGCT GGCCTCGCTC
GGTCTCGCGC TTCTCGCCGC GCGCGCCTAT GGCCTCGTCA TTCTCGACGG CGTCTATAAC
GACATCAAGA ACGATGAAGG CTTCGCCGCC ATCTGCGAGC ATGGCCGCGA CATGGGTTTC
GACGGCAAGA CGCTCATTCA TCCCTCCCAG GTCGGGCCTT GCAACACCAT CTTCTCGCCG
GACCCGGAGA CGGTCGACTT CGCGCGGAAA ACCATCGAGG CGTTCGAGCA GCCGGAAAAC
AAGGGCAAGG GCGTGCTCAA GGTCGATGGC AAGATGGTCG AGATACTGCA TGCCGAAATC
GCGAAGCGCA CCGTCGCCAT CGCGGATGCG ATCAGGGAGC TTGAAGCGGC ATCCTGA
 
Protein sequence
MADLAARPRR SVLYMPGSNG RALEKAREIP ADALILDLED AVAPDAKEEA RNQVCAAVKL 
GGYGKREIII RVNALDTPWG LDDIKAAVAA GPDAILVPKI NSAADVERAE NALSDAGALG
RVQLWCMIET PLAMLNIQSI AQKAREPGSR MCVWVMGTND IAKELRAAHT PDRVPMLASL
GLALLAARAY GLVILDGVYN DIKNDEGFAA ICEHGRDMGF DGKTLIHPSQ VGPCNTIFSP
DPETVDFARK TIEAFEQPEN KGKGVLKVDG KMVEILHAEI AKRTVAIADA IRELEAAS