| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1425 |
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| Symbol | |
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| ID | 5454507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1555843 |
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| End bp | 1556949 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876998 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001412702 |
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| Protein GI | 154251878 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA ACATCCTCAT CGTCGCCGGC GACGGCATCG GCCCGGAAGT CATGGGCGAA
GTCGAGCGCG TGATCGGCTG GTTCAACGAC AATCGCAAGT TCGACGCGAA GATCGAAAAC
GAGCTTGTCG GCGGCTGCTG CTACGACGCG CATGGCGTCG CGGTGACGGA CGAGACGGTC
GAGAAGGCGA AGCGCGCGGA TGCCGTCATG CTCGGCGCGG TGGGCGGGCC GAAATGGGAT
AACGTGCCTT ACGAGGGCCG CCCGGAAGCC GGCCTGCTGC GGCTGCGCAA GGATCTCGAA
CTCTTCGCGA ACCTTCGTCC CGCGCTCTGC TTCGCGGCGC TCGCGGACGC ATCCTCGCTG
AAGCGCGAGA TCGTCGAGGG CCTCGACATC ATGATCGTGC GCGAGCTCAC CGGCGGCGTC
TATTTCGGCG AGCCGAAGGA AATCACCGAT CTCGGCAATG GCGAGCGGCG CGGCGTCGAC
ACGCAGGTCT ATACGACGAG CGAAATCCGC CGTATTGCGG AAGTCGCCTT CGATCTCGCG
AAGAAGCGCG ACAATCGCGT CATGTCGGTC GAGAAGCGCA ACGTGATGAA GTCCGGCGTC
CTCTGGTACG AGGAAGTGAA GACGCTCCAC GGTGAGAAGT TCTCCGACGT GAAGCTCGAG
CACATGCTGG CCGACAATTG CGCCATGCAG CTCGTGCGCA ATCCGAAGCA GTTCGACGTG
ATCGTCACCG ACAATCTCTT CGGCGACGTC CTCTCCGACA TCGCCTCCAT GCTCACGGGC
TCGCTCGGCA TGCTGCCTTC CGCCTCGCTC GGCGCGAAGG ATGCGAGCGG CAAGGCCTGC
GCCATGTATG AGCCGGTGCA TGGCTCCGCG CCCGACATCG CGGGCACGGG CGCGGCCAAT
CCCATCGCCT CGATCCTCAG CTTCGCCATG GCGCTTCGTT ACACGTTCGA GCTCGGCGCC
GATGCCGACC TGCTCGAAAA AGCGGTCGAC AAGGTGCTCG CCGACGGGCT CCGCACCGGC
GACATCATGC AGCCGGGCAT GAAGAAAGTC GGCACAAAGG AAATGGGCGA CGCCATCCTC
GCCGCCCTCG CGAAACTGAA CGGATAG
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| Protein sequence | MTRNILIVAG DGIGPEVMGE VERVIGWFND NRKFDAKIEN ELVGGCCYDA HGVAVTDETV
EKAKRADAVM LGAVGGPKWD NVPYEGRPEA GLLRLRKDLE LFANLRPALC FAALADASSL
KREIVEGLDI MIVRELTGGV YFGEPKEITD LGNGERRGVD TQVYTTSEIR RIAEVAFDLA
KKRDNRVMSV EKRNVMKSGV LWYEEVKTLH GEKFSDVKLE HMLADNCAMQ LVRNPKQFDV
IVTDNLFGDV LSDIASMLTG SLGMLPSASL GAKDASGKAC AMYEPVHGSA PDIAGTGAAN
PIASILSFAM ALRYTFELGA DADLLEKAVD KVLADGLRTG DIMQPGMKKV GTKEMGDAIL
AALAKLNG
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