Gene Plav_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1409 
Symbol 
ID5454318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1541236 
End bp1541790 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID640876982 
ProductMarR family transcriptional regulator 
Protein accessionYP_001412686 
Protein GI154251862 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCA GAAAGCCAAC CGGAAATTTT GATCTAGAAA GCTCGCTGAG CCATTTGCTG 
CGCCGCGCAC AACAATTTGC CTATGATCAG TTCGTGCAGC AGATGGGCGA CAGCGCGCTG
ACGCCGCGCC AGTTCATCGT ACTCTTCGCG GTGGACGAGG AAGAAGGCCT GAGCCAGACC
GATCTCGTGA ACCGCACGGG CATCGACCGT TCGACGCTCG CCGACATGAT CAGCCGCATG
ATCAAGAACG GCCTTCTTGC CCGCCGCCGC ACGGCGGAAG ACGCGCGCGC CAACGCCGTT
CGCCTGACGG CGGCAGGACG CCGCGCGCTG AAAGGCGCGA TGCCGAAGGC GATGGCAGCC
GAGAAGGCGC TGCTCGATGT ACTGCCGAAG TCCACGCAGG CCGATCTGAT GAAAGGCCTG
ACGCAGTTGA ACAACGCCAT CGAAAGCCAG AAGACCGAGG ACGCCGCGCC GAAGGCGCCG
GCGAAGCGGG CGGCGGCAAA GCCTGCCCGC AAGACGGCGG CGAAAAAGCC GGCCGCACGC
CGCAAGAAGG CCTGA
 
Protein sequence
MAARKPTGNF DLESSLSHLL RRAQQFAYDQ FVQQMGDSAL TPRQFIVLFA VDEEEGLSQT 
DLVNRTGIDR STLADMISRM IKNGLLARRR TAEDARANAV RLTAAGRRAL KGAMPKAMAA
EKALLDVLPK STQADLMKGL TQLNNAIESQ KTEDAAPKAP AKRAAAKPAR KTAAKKPAAR
RKKA