Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1409 |
Symbol | |
ID | 5454318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1541236 |
End bp | 1541790 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876982 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001412686 |
Protein GI | 154251862 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCA GAAAGCCAAC CGGAAATTTT GATCTAGAAA GCTCGCTGAG CCATTTGCTG CGCCGCGCAC AACAATTTGC CTATGATCAG TTCGTGCAGC AGATGGGCGA CAGCGCGCTG ACGCCGCGCC AGTTCATCGT ACTCTTCGCG GTGGACGAGG AAGAAGGCCT GAGCCAGACC GATCTCGTGA ACCGCACGGG CATCGACCGT TCGACGCTCG CCGACATGAT CAGCCGCATG ATCAAGAACG GCCTTCTTGC CCGCCGCCGC ACGGCGGAAG ACGCGCGCGC CAACGCCGTT CGCCTGACGG CGGCAGGACG CCGCGCGCTG AAAGGCGCGA TGCCGAAGGC GATGGCAGCC GAGAAGGCGC TGCTCGATGT ACTGCCGAAG TCCACGCAGG CCGATCTGAT GAAAGGCCTG ACGCAGTTGA ACAACGCCAT CGAAAGCCAG AAGACCGAGG ACGCCGCGCC GAAGGCGCCG GCGAAGCGGG CGGCGGCAAA GCCTGCCCGC AAGACGGCGG CGAAAAAGCC GGCCGCACGC CGCAAGAAGG CCTGA
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Protein sequence | MAARKPTGNF DLESSLSHLL RRAQQFAYDQ FVQQMGDSAL TPRQFIVLFA VDEEEGLSQT DLVNRTGIDR STLADMISRM IKNGLLARRR TAEDARANAV RLTAAGRRAL KGAMPKAMAA EKALLDVLPK STQADLMKGL TQLNNAIESQ KTEDAAPKAP AKRAAAKPAR KTAAKKPAAR RKKA
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