| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1390 |
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| Symbol | |
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| ID | 5456086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1520049 |
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| End bp | 1520600 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876963 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001412667 |
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| Protein GI | 154251843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC TGTTCACAGC ACTGGAAATT CCTGACGAGG CGGCGGAGAA GCTCATGCGG
CTGCAGCAGG GGCTTGACGG TGCGCGCTGG ATCGAGCGGC CGGATTTTCA CATCACGCTG
CGTTTCATGG GCGATGTGCC GGAGAATGTC GCCGCCGATA TTGACGAGGC GCTGGCGGAG
ATTCCGATGG AGCCTTTCGA GGTGGAGCTG GAAGGCGTCG GCGAATTCGG CGGCAAGCGG
CCGCATACGC TCTGGGCGGG CGTGAAAATG TCGGAGCCTC TGCGCGTGCT GCAGGGGCGG
CACGAAAGCG CGATGCGGCG CGTGGGCCTC AAGCCCGAAA CGCGGAACTA CACGCCGCAT
GTCACCATCG CGCGGCTGTC GCATGTGAGC ACCGACGAAG CCTATCGCTT CATCGAGGCG
AACAACCTCT TCGCCGCGCC CCGCTTCGAG GTGGAGCAGT TCACTCTCTT CTCCGCGAAG
GCGAGCACGG GCGGCGGGCC TTACGTCGTC AAGACGCGCT ATCCGGATTT CGGCTGGGTG
GAGGAAGAGT AG
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| Protein sequence | MIRLFTALEI PDEAAEKLMR LQQGLDGARW IERPDFHITL RFMGDVPENV AADIDEALAE
IPMEPFEVEL EGVGEFGGKR PHTLWAGVKM SEPLRVLQGR HESAMRRVGL KPETRNYTPH
VTIARLSHVS TDEAYRFIEA NNLFAAPRFE VEQFTLFSAK ASTGGGPYVV KTRYPDFGWV
EEE
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