Gene Plav_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1383 
Symbol 
ID5455296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1514870 
End bp1515592 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID640876956 
Producthypothetical protein 
Protein accessionYP_001412660 
Protein GI154251836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGCG GGCTGGTGGC GCTGGGCGCG ATGTTCGGCT TTGCCGTTCT GGTGCTTTTC 
GGCTTCCTCA TCTATGTGCT GCTCGCATCG GGCGATCCGA AATACTGGGA AGGCGAAATC
GCCGCCTTCG AGCGGCGCGA CGTTTCCAAT CCGCCGCCTT CCGATGCCGT GCTCTTTGTC
GGCGGCCGCG ATCTCAGGCT CTGGCCGTCG CTGCAGGAAG ACATGGCGCC CGTGCCCGTC
ATCCAGCGCG GCTTCGGCGG TGCGCAGATC CCGCATATCA ATCACTATCG CTCACGCATC
ATTCTGCCCT ACCGGCCGCG CGCCATTCTC ATCATGGCGG GCGATGCGGA CCTCGCCGAT
GTGCGCGGGC GGCGGCCGGA AGATGTTCTC GACGATTTCC GCACGCTAGT TCTTTCGCTC
CGCGCCGAGG GCGAGGACGC GCCGATCTAT TTCATTTCGC TGCGTCCCTC GCCCGCGCGC
GACGAGCGCT GGTACGGCGC GCAGCGCGCC AATGCGCTGA TCGCGGATTA CGTCGCCGGC
CAGCGCGGCA TGTATTTTCT CGACGTGACG GCGAAGATGC TTGATGCCAA AGGCAATATT
CGCGACGACC TGTATCGCTG GGACGGGCTC ACGCTCAATG AGCAGGGCTA CAGGGTTCTC
GCGGAGGCGA TCAAGCCGGC GCTGATCGAA GCGGGCTATG GCGGCTTGCG GTCGAGCCGG
TAA
 
Protein sequence
MRRGLVALGA MFGFAVLVLF GFLIYVLLAS GDPKYWEGEI AAFERRDVSN PPPSDAVLFV 
GGRDLRLWPS LQEDMAPVPV IQRGFGGAQI PHINHYRSRI ILPYRPRAIL IMAGDADLAD
VRGRRPEDVL DDFRTLVLSL RAEGEDAPIY FISLRPSPAR DERWYGAQRA NALIADYVAG
QRGMYFLDVT AKMLDAKGNI RDDLYRWDGL TLNEQGYRVL AEAIKPALIE AGYGGLRSSR