Gene Plav_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1333 
Symbol 
ID5453408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1469254 
End bp1469613 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID640876904 
Producthypothetical protein 
Protein accessionYP_001412610 
Protein GI154251786 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000163831 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCTGA CCTATCGCGA GTTCAACAGC TTCTGCGGCT CGCTGCCCGC CACCACTTAT 
GTCGTGCAAT GGGGCGGCGC GCATGTCTGG AAGGTGGGCG GCAAAGTCTT CGCGATCGGC
GGCTGGGAAC GCGGCCATCA TCCCGGCATC ACCTTCAAGG TCTCCGAGAT CGGCTGGGAA
ATCCTGCGCG AGGCCGAAGG CTGCCGCCCG GCGCCTTATC TCGCCTCGCG CGGCATGAAG
TGGATCCAGA GCTACGACAC GGGCCTCGGC AAACGGGAGC TGAAACAATA TCTGAAAGCC
TCGCATGACC TGGTCGCGGC GGGACTGAGC AGGAAGAAGC GCGCGGAGCT TGGGCTCTGA
 
Protein sequence
MPLTYREFNS FCGSLPATTY VVQWGGAHVW KVGGKVFAIG GWERGHHPGI TFKVSEIGWE 
ILREAEGCRP APYLASRGMK WIQSYDTGLG KRELKQYLKA SHDLVAAGLS RKKRAELGL