Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1333 |
Symbol | |
ID | 5453408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1469254 |
End bp | 1469613 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876904 |
Product | hypothetical protein |
Protein accession | YP_001412610 |
Protein GI | 154251786 |
COG category | [S] Function unknown |
COG ID | [COG2315] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0000000163831 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCCCCTGA CCTATCGCGA GTTCAACAGC TTCTGCGGCT CGCTGCCCGC CACCACTTAT GTCGTGCAAT GGGGCGGCGC GCATGTCTGG AAGGTGGGCG GCAAAGTCTT CGCGATCGGC GGCTGGGAAC GCGGCCATCA TCCCGGCATC ACCTTCAAGG TCTCCGAGAT CGGCTGGGAA ATCCTGCGCG AGGCCGAAGG CTGCCGCCCG GCGCCTTATC TCGCCTCGCG CGGCATGAAG TGGATCCAGA GCTACGACAC GGGCCTCGGC AAACGGGAGC TGAAACAATA TCTGAAAGCC TCGCATGACC TGGTCGCGGC GGGACTGAGC AGGAAGAAGC GCGCGGAGCT TGGGCTCTGA
|
Protein sequence | MPLTYREFNS FCGSLPATTY VVQWGGAHVW KVGGKVFAIG GWERGHHPGI TFKVSEIGWE ILREAEGCRP APYLASRGMK WIQSYDTGLG KRELKQYLKA SHDLVAAGLS RKKRAELGL
|
| |