Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1330 |
Symbol | |
ID | 5456479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1465615 |
End bp | 1466094 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640876901 |
Product | nuclease |
Protein accession | YP_001412607 |
Protein GI | 154251783 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000000000142245 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTGCGT ATCTCGCCTC CCTTTTTGCC CTGTCGGCGG CCTTTCCCTC ATCCGCCGCC TTTGCCGCCG AGCGCCTTGC CGGTCCGGTC GAGGCGGAGG TGGTGCGCGT GATCGACGGG GATTCGCTCG TCGTGCGCGC CCGCATCTGG CTCGGCCAGA CGGTCGAGAC GCATGTCCGG CTTGCCGGTA TCGACACGCC GGAGCTCAGG GGCAAATGCG AGGAAGAGAA GGCGAGGGCG CGGGCGGCGC GCGATGCGTT GGCGTCGCTG ACGCAAGGGC GGGTCCGTCT CAGCGACATC GAGACCGACA AATATGGCGG CCGCGTGCTG GCGCGGATCG AAAGCGCATT TCATGGCGAC GTCGCCGCCG CCCTCATCGC GAAGGGCCAT GCGCGTGTCT ATGATGGCGG CGCGCGGGCG GGCTGGTGCC GCCTCGCCGC GCTGCCGCTC GCACCGCCGC CCGAAGAGAG CGCGAACTAG
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Protein sequence | MRAYLASLFA LSAAFPSSAA FAAERLAGPV EAEVVRVIDG DSLVVRARIW LGQTVETHVR LAGIDTPELR GKCEEEKARA RAARDALASL TQGRVRLSDI ETDKYGGRVL ARIESAFHGD VAAALIAKGH ARVYDGGARA GWCRLAALPL APPPEESAN
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