| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1292 |
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| Symbol | |
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| ID | 5454499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1424179 |
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| End bp | 1424658 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876862 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001412569 |
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| Protein GI | 154251745 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.430842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAA GTCGGACGGA AGCAAAAGGC GAGTGGCCGC CGAATATCCA GGCGGTGTTC
AAGCGTATGG CCCCTGCAAG CCGTTATCTT GGGTTGGAGA TCCTCGAGGC AGACCGCGAG
AAACGCCGCG TCAAGGTGGC ATTCAATGCA AGTGCCGAGC TCTGCAACAT GTGGGGCGGC
ATCCAGGGCG GCATGGTGGC GGCCATGCTC GATGATGTTA TGAGCCTCGC CGTCGGCCTC
GATCTCGAAT GGGGGCAGAT TTCGCCGACG CTCGAGCTGA AAGTCTCGAT GCTCAATGCC
GCGCGGCCGG GCCGCATCAT CGGCACGGGC CATGTCATAA AGCGCGGCAA GTCTGTCGGC
TTCATAGAGG GTGAACTGGT CGACGAGGAT GGGAAGCTTC TCGCGACCGG CAGTTCCACA
GCAACATTTG TCACACTGAA AAAAAAGCCC GCCCCGCAGG AAGAAGCGCC TCAGGCGTAA
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| Protein sequence | MSESRTEAKG EWPPNIQAVF KRMAPASRYL GLEILEADRE KRRVKVAFNA SAELCNMWGG
IQGGMVAAML DDVMSLAVGL DLEWGQISPT LELKVSMLNA ARPGRIIGTG HVIKRGKSVG
FIEGELVDED GKLLATGSST ATFVTLKKKP APQEEAPQA
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