Gene Plav_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1263 
Symbol 
ID5453452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1394734 
End bp1395150 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content63% 
IMG OID640876833 
Productglutathione-dependent formaldehyde-activating GFA 
Protein accessionYP_001412540 
Protein GI154251716 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGG GTTCCTGTCT TTGCGGCGCG GTACGCTTCG CGGCGAAGCG CGGCAGCGGA 
ATTGTCGTCT GTCACTGTTC GATGTGCCGC AAGGCGGCGG GGGGTGCCTT CGGCGCCTTC
TTCGTCGCGT TGCGCGATGA AGTGACATGG GAGGGCGCGG AGCATTTGAG CACCTATCGC
TCATCGCCCA CCCTCGAACG CGCCTTCTGC AGGCAGTGCG GCACGGCAAT GACCGGCGCG
AACCTCACCG AACCGGACGA AACGATCATC CTTGCGGCGA ACGCATTGGC GGATGATGCG
CCTCTGCGTG TCATTGCCGT CGAGCACGCC GCCTCAAAAG CGACATGGGC GGGCGATATC
GATGAGGCGC CGCATTTCGA CGGTCCTTAT CCTGGATGGG AAAAACTGAA GCCATGA
 
Protein sequence
MIRGSCLCGA VRFAAKRGSG IVVCHCSMCR KAAGGAFGAF FVALRDEVTW EGAEHLSTYR 
SSPTLERAFC RQCGTAMTGA NLTEPDETII LAANALADDA PLRVIAVEHA ASKATWAGDI
DEAPHFDGPY PGWEKLKP