| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1246 |
|---|
| Symbol | |
|---|
| ID | 5455061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1380165 |
|---|
| End bp | 1380806 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640876816 |
|---|
| Product | Smr protein/MutS2 |
|---|
| Protein accession | YP_001412523 |
|---|
| Protein GI | 154251699 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.731198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG AGACCGACAA GAAGGCGCCG CGCCGCAAAT CCCGTAGCCG CAGTCTGAGC
GATGAGGAGC GGAAGCTCTG GCGTGCGGTC GTGAAGGATG CAAAGCCGCT TGCCCGGAAG
CGGAGCATCC ATGCCGCCGA AGCGGCGCTG CCGGCGGAAA TGCTCTCAAG CGCCGCCACC
CCGCCCGCGC CGCAGCCAAA GCGCATGCCG GCATCCGTCG TGCCCCCTCC CTCGCCTGCC
CCGCGCCGCG CCCCCGAACC GCCGCCGCTG ACCGGCCTTG AGCGGCGGAC CAGCCAGCGC
CTCGCGCGCG GCCAGATGGA AGTCGAAGCG ACACTCGACC TGCATGGCCA CAGCCAGGCG
GAAGCACATG GCGCGCTGCT CGGCTTTCTT TCGCGGGTGA GAGCGCGCGG GCTGCGTTGC
GTTCTCGTCA TCACCGGCAA GGGCGCCTCG CCCTATGCCC GCCACACGCT TCACGGCGCG
GAATTCTACG AAGTGCCGGA GCGGCAGGGT GTGCTCAGAA GCGCGGTGCC GCGCTGGCTG
AACGAGGCCG ATTTCCGGGC CCATGTATCG GGCTTTCAGC CCGCGCACCC GAAACATGGC
GGCGGCGGCG CTTTCTATAT CTGGCTGCGC AAGAAAAGAT GA
|
|---|
| Protein sequence | MADETDKKAP RRKSRSRSLS DEERKLWRAV VKDAKPLARK RSIHAAEAAL PAEMLSSAAT
PPAPQPKRMP ASVVPPPSPA PRRAPEPPPL TGLERRTSQR LARGQMEVEA TLDLHGHSQA
EAHGALLGFL SRVRARGLRC VLVITGKGAS PYARHTLHGA EFYEVPERQG VLRSAVPRWL
NEADFRAHVS GFQPAHPKHG GGGAFYIWLR KKR
|
|---|
| |