Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1231 |
Symbol | |
ID | 5454612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1366218 |
End bp | 1367309 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876801 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001412508 |
Protein GI | 154251684 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.388459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGC GTTTCAAAGC TGCCGCCAAG ACGAACGGCG AGGGTTCTGC CGCGTCCGCC CGCAAGGGTG GTGCCGATGA TCATGCGATC GTCGGACGCC GTATCAGCCA GGAAGCGCTG AAGCGTCTGA GCGAGCTCCA CACGCGCTAT CTCAAGGGCA TCCCGAACGG CTGGTGCGCG GTGATGAAGG AGTGCGATCT GTCGGGTCTC GATTTTCGCA ACCTCAACTT CTCGCATGGT CATTTCATCG GCTGCGACTT CACAGGCTGC GACCTTGAAG ACGCGCATTT TTCGGGCGCC AATCTTTTCA GCGCAAATTT CGACCATGCG AATCTCACAC GCACCAATTT CTCGCGCGCG GATTTGCGGG GCGCGAATTT CGAAGATGCC GAAATGGCGG ATGCACAGCT CGATGGTGCC GACCTGCGGC GTGGCGCGGT GATAAGGCGC GGCGCCTCGG CACCTGTTGG CCGCGAGAAT TCGAGCTTTC GCGGTGCACG GATGTACGGC ACCAACATGG CCGAATGCAA ACTTCTCGAC GCCGATTTCG AAGGGGCCTC TATCTCCGGC GCTAGCCTGC AAGGTGCCGA TCTGCGGGGT GCGAACTTTG CGGGTGCCGA GCTCAAGGGC GTCGAATTGT CGGGGGCTAA TCTCGCCGAT GCGGATTTCC GCCGCGCCGT CATGGACGAG GCGACAATCG CGCGCGGCGA CATGATGCGG GCGACCAGGC CGAGGCCGGC GCCCAATCCC GAACGCATGG AAAAAATACT GGCGCTTCAT CTCGAGTGGA TCCAGACCGG CCAGCAAAAA GGCCAGCGCG CCGATTTCAC CCGGATGGAT CTCTCGCGAA AGGATTTCTC CAGGGCCGTG CTTGCCGGGG CCCATTTCCG TGAGGCCATC CTCGCCGATG CAAATTTCGA AAAGGCGATC CTTGCCGCCG CCGATTTCAG CAATGCGATC CTGTTTCGCG CCAACCTCGC CGGGGCCGAT CTCCGGGGCG CCGATCTCAG GGGTGCCGAT CTGAAGAATG CCCGGCAGGA TGACACCAAG AAGGGCGAGC TGGACGGCAC CAGCCTGGCC ACCAGGCTCT GA
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Protein sequence | MSERFKAAAK TNGEGSAASA RKGGADDHAI VGRRISQEAL KRLSELHTRY LKGIPNGWCA VMKECDLSGL DFRNLNFSHG HFIGCDFTGC DLEDAHFSGA NLFSANFDHA NLTRTNFSRA DLRGANFEDA EMADAQLDGA DLRRGAVIRR GASAPVGREN SSFRGARMYG TNMAECKLLD ADFEGASISG ASLQGADLRG ANFAGAELKG VELSGANLAD ADFRRAVMDE ATIARGDMMR ATRPRPAPNP ERMEKILALH LEWIQTGQQK GQRADFTRMD LSRKDFSRAV LAGAHFREAI LADANFEKAI LAAADFSNAI LFRANLAGAD LRGADLRGAD LKNARQDDTK KGELDGTSLA TRL
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