| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1231 |
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| Symbol | |
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| ID | 5454612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1366218 |
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| End bp | 1367309 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876801 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001412508 |
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| Protein GI | 154251684 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.388459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGC GTTTCAAAGC TGCCGCCAAG ACGAACGGCG AGGGTTCTGC CGCGTCCGCC
CGCAAGGGTG GTGCCGATGA TCATGCGATC GTCGGACGCC GTATCAGCCA GGAAGCGCTG
AAGCGTCTGA GCGAGCTCCA CACGCGCTAT CTCAAGGGCA TCCCGAACGG CTGGTGCGCG
GTGATGAAGG AGTGCGATCT GTCGGGTCTC GATTTTCGCA ACCTCAACTT CTCGCATGGT
CATTTCATCG GCTGCGACTT CACAGGCTGC GACCTTGAAG ACGCGCATTT TTCGGGCGCC
AATCTTTTCA GCGCAAATTT CGACCATGCG AATCTCACAC GCACCAATTT CTCGCGCGCG
GATTTGCGGG GCGCGAATTT CGAAGATGCC GAAATGGCGG ATGCACAGCT CGATGGTGCC
GACCTGCGGC GTGGCGCGGT GATAAGGCGC GGCGCCTCGG CACCTGTTGG CCGCGAGAAT
TCGAGCTTTC GCGGTGCACG GATGTACGGC ACCAACATGG CCGAATGCAA ACTTCTCGAC
GCCGATTTCG AAGGGGCCTC TATCTCCGGC GCTAGCCTGC AAGGTGCCGA TCTGCGGGGT
GCGAACTTTG CGGGTGCCGA GCTCAAGGGC GTCGAATTGT CGGGGGCTAA TCTCGCCGAT
GCGGATTTCC GCCGCGCCGT CATGGACGAG GCGACAATCG CGCGCGGCGA CATGATGCGG
GCGACCAGGC CGAGGCCGGC GCCCAATCCC GAACGCATGG AAAAAATACT GGCGCTTCAT
CTCGAGTGGA TCCAGACCGG CCAGCAAAAA GGCCAGCGCG CCGATTTCAC CCGGATGGAT
CTCTCGCGAA AGGATTTCTC CAGGGCCGTG CTTGCCGGGG CCCATTTCCG TGAGGCCATC
CTCGCCGATG CAAATTTCGA AAAGGCGATC CTTGCCGCCG CCGATTTCAG CAATGCGATC
CTGTTTCGCG CCAACCTCGC CGGGGCCGAT CTCCGGGGCG CCGATCTCAG GGGTGCCGAT
CTGAAGAATG CCCGGCAGGA TGACACCAAG AAGGGCGAGC TGGACGGCAC CAGCCTGGCC
ACCAGGCTCT GA
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| Protein sequence | MSERFKAAAK TNGEGSAASA RKGGADDHAI VGRRISQEAL KRLSELHTRY LKGIPNGWCA
VMKECDLSGL DFRNLNFSHG HFIGCDFTGC DLEDAHFSGA NLFSANFDHA NLTRTNFSRA
DLRGANFEDA EMADAQLDGA DLRRGAVIRR GASAPVGREN SSFRGARMYG TNMAECKLLD
ADFEGASISG ASLQGADLRG ANFAGAELKG VELSGANLAD ADFRRAVMDE ATIARGDMMR
ATRPRPAPNP ERMEKILALH LEWIQTGQQK GQRADFTRMD LSRKDFSRAV LAGAHFREAI
LADANFEKAI LAAADFSNAI LFRANLAGAD LRGADLRGAD LKNARQDDTK KGELDGTSLA
TRL
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