Gene Plav_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1224 
Symbol 
ID5453844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1357160 
End bp1357753 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID640876794 
Producthypothetical protein 
Protein accessionYP_001412501 
Protein GI154251677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.87717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGC TGACCGAACA GATTCTGTCG CATATGACGG GTTTGCCCGA GGGCGCTTCT 
GTGTCCGCTA AGGGGCTGCT CCATCTCGGC AATCGCGCCG CAGTGGACCA GGCCTTGTCG
CGTCTGGCCG AGCGCGAACA ACTCATCCGG GCTGGGCGCG GTGTCTATCT CCGCCCCGTC
GCCAGTCGAT TCGGGACGCG CGCGCCGTCG GTGGAACAGG CTGTGGAAGC CCTTGCCAGC
CAGCGTGGCG AGACCATCGT CTCGAACGGT GCGGCGGCCG CAAACGCCCT TGGCCTGACG
ACGCAGGTGC CGGTTCGCTC GGTCTATCTG ACCTCCGGGC GCAGCCGGAA GATGAATCTC
GGCAAGCAGG TCGTGGAATT GCGCCATGCC CCGCGCTGGC AACTGGCTCT GGCCAACCGG
CCGGCGGGAG AGGCCGTCCG GGCCTTGGCT TGGCTCGGCC CGGAGAAAGC CGAAACTGCG
CTCAGGACAT TGAAGCGAAA GCTGCCGCCC GGCGCCTTTG GCGAATTGGT GGCGGCCGCG
CCGCAGCTTC CGACATGGTT GGCGCAGAGT GTCGGGAAGG CGGCCTATGG CTGA
 
Protein sequence
MTRLTEQILS HMTGLPEGAS VSAKGLLHLG NRAAVDQALS RLAEREQLIR AGRGVYLRPV 
ASRFGTRAPS VEQAVEALAS QRGETIVSNG AAAANALGLT TQVPVRSVYL TSGRSRKMNL
GKQVVELRHA PRWQLALANR PAGEAVRALA WLGPEKAETA LRTLKRKLPP GAFGELVAAA
PQLPTWLAQS VGKAAYG