Gene Plav_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1135 
Symbol 
ID5455251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1251156 
End bp1252499 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID640876705 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001412413 
Protein GI154251589 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAGCA AGAGCAGCAC AGCCCCCCGC CGCGCCATTG TCATCGGCGC CAGCACCACC 
GGCCTCATCG CGGCGGCGGC GCTCGCTCGT CACTTCGCAC ATGTCATGGT GCTGGAGCGC
GACACGCTTC CCGAGGAGCC CGAATGGCGC AAGGGCGTGC CCCAGTCGCG CCATGTCCAT
CTCCTGCTTC GCTGCGGTGA GGAAATCATC AGCCATTATT TCCCTGGCCT GACGGATGAG
CTTGTTGCCG CCGGCGGCCG CCGCGTCGAT ATGGCGGGCG ACACCCGCTG GTTTTATGCG
GGCGGCTGGA AAGCGCGCTT TCAAAGCGGC ATCACCATGC ATTGCCAGAG CAAGGGCTTC
CTCGAATGGG CGATCCGCCG CCGCGTCGAG TCACTCGGCA ACGTCACCAT CCGCGACCGC
GCCGAAATCG ACACCTTCAC CACGGCGCCC GGTTCCGTCA CAGGCGTCCG GCTGAAGGAT
GGCGAGGAAA TCGCAGCCGA TCTCGTCGTC GACGCGTCGG GCCGCAACTC GAAAACGCCA
CAGCGCCTCG CCGCCCTCGG CTTCGGCACT GTCGAGATAT CGGAACTGCC CGTCGATGTC
GGCTACGCCA CTCGCGCCTA TCGGATGCCG CGCGGCGCGC GCGACTGGCA ATCCCTCATC
GTTCACCCGC GCTACCCGGA TGCCCGTATC GGCGTCATCA TCCCGGTAGA GGGCGATCGC
TGGCTCGTCA CGCTGGTTGG CTGGCGCGGC GATCAACCGC CCGCCGATGA CGAGGGCTTC
CTCGAATTCG CACGCGGCCT TTCCGTCCCG GACATCTACG AGGCGATCCG CGATGCCGAA
CCGCTCACGC AGGCCGGCCT CCACCGCTTC CCGGGCAATC TCCGCCGCCA CTATGACCGC
CTTGCCACCA TGCCGGATGG CTTGGTTGTT ATCGGCGACG CCGCTTGTTC GTTTAACCCG
ATCTACGCCC AGGGCATGAC GCAAGGCGCC ACAGCCGCGC GCATCCTCGA CGATTGCCTC
GAGCGCCGCG CGAAGCACGG CAATTCGGGC CTTGCTGGCT TCGGCCCCGT CTTCCAGCGC
GAATACGCAA AATTTGCCAA TCGCTGCTGG CTTATCTCCA CGACAGAGGA ATACCGCGAT
CCGCTTGTCG CCCCTCATCC GCCACTCTGG ACGAGGCTCG CCAACTGGTA TCTCGAACAG
GTCCACGAGC TCTCATGGAG CGATCGCCGG GCTGCGAAAA GCTTTCTCGA AGTCATGCAT
CTGCTTCGCC CGCCGGCTTC TCTGCTCTCG CCCGGGCTGG CAACCCGCGT CCTCGCGCAT
AGCCTCTTCG CCCGCGCGCA CTGA
 
Protein sequence
MASKSSTAPR RAIVIGASTT GLIAAAALAR HFAHVMVLER DTLPEEPEWR KGVPQSRHVH 
LLLRCGEEII SHYFPGLTDE LVAAGGRRVD MAGDTRWFYA GGWKARFQSG ITMHCQSKGF
LEWAIRRRVE SLGNVTIRDR AEIDTFTTAP GSVTGVRLKD GEEIAADLVV DASGRNSKTP
QRLAALGFGT VEISELPVDV GYATRAYRMP RGARDWQSLI VHPRYPDARI GVIIPVEGDR
WLVTLVGWRG DQPPADDEGF LEFARGLSVP DIYEAIRDAE PLTQAGLHRF PGNLRRHYDR
LATMPDGLVV IGDAACSFNP IYAQGMTQGA TAARILDDCL ERRAKHGNSG LAGFGPVFQR
EYAKFANRCW LISTTEEYRD PLVAPHPPLW TRLANWYLEQ VHELSWSDRR AAKSFLEVMH
LLRPPASLLS PGLATRVLAH SLFARAH