| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1117 |
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| Symbol | |
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| ID | 5455663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1228132 |
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| End bp | 1230429 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876687 |
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| Product | hypothetical protein |
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| Protein accession | YP_001412395 |
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| Protein GI | 154251571 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.103936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAGT CAAAAAATCC GGCCTTGCGG TTTCCCCGCA CGACCATTGC ATTGTGTCTG
GCGGTCTGCA TTGCGGCGGC CCTCGGCGTC TTTCAGTTCA AGCTGTCCTA TGACACGCGG
GTTTTCTTCA ACCCGGCGGG GCAGGACATC GCGACCTTGC GTGGCTTTGA AGCCAAATAC
GGCCAGAACA ACGATTTGCT CATGGTCGTC TGGGCCGGAG GTCGCGATAT AGCGGAGCCT
GACACGCTCG CCGCCATGGG CGATCTTGTT GCGCGCGCAT GGCGACTGCC CCATTCGACC
CGCGTCGACG GGCTTACAAA TTTCCCCCAT GTCCAGTCGG ATGCGGACAG TTTCTCCGTC
GCCGACCTGG TGCCGGACCC CGCCAATGTG AGCCTTGCCG AAGCGCAGGA AATCGGCCGC
ATAGCGATTG ATGACCCGCT GATCCGCAAT CGCCTGATGG CGGAAGACGG AAAGGCGGCT
GGCATCGTCG TCAATTTCAA CCTGCCGGGC GAAGCGTCAG CCGAGGTGCG CGAAATCATT
GCGGCTGCTC GCGCTCTCGC GAAAGATTTC GAAGCGGATT ATCCCGGTAT AGAGGTGAAG
CTGACCGGCA ACGTTATGCT GATGGGCACC TTTTCCGAAG CGGCCATGAA CGACGTGATG
GTGCTCATCC CCATCAGCCT CCTGGTAACT TCGCTTGTGA TGTTTGCCTT CGTGCGCGCG
GTGCTTCCGA GCATAGGCAT TCTATCGCTG CTCGGACTAT CAAGTGCCGC CGCGATGGGT
GCCGCTGGCT GGTACGGCTA CGAGATCAAC ACGGCGACAG TCGCCTGTCC TGTCATCATC
ATGACCGTAA ATATGGCGGC AGCCGTCCGT ATCGTGACGA CAGCCATGGG CGCTCTTGGT
AGAGGTCTGT CGCGCAATGA AGCGATTGCA GAGGCGATCT CGATCAATCT CTGGCCGGTA
ACGCTTACCA ATGCGACCAC GATGATCGGC TTCCTTGCGA TGAACCTTGC CGATGCGCCG
CCACTGCGCG AGCAGGGTAA CATAGTGGTT GTCGGCATCC TGTTCGCGTA TCTCTTCACC
TTTACCTGGC TGCCCGCCAT TCTTTCGCTG ATGCCGCTTC GTCCGGCGGT GCAGCGCTCC
GAGCGGGTAA TGATCCTGCT CGGTCACTTC GTGAACCGCT ACTACAAGCA GCTGTTTTTT
CTTTGCAGCA TGATCGTCCT CGCCTGCGCG GTGTGGTTGG GCAACATTCG GCTCGACGAC
GATTTTGCAC GATATTTCGA TCAGCGTTTC GAATATCGGC AGGACTCCGA TTTTGCCGAG
GAACGGCTGA CTGGCCTCAA CATCGTTGAG TTCGACGTCG GGGCGGGAAC GGAAGGCGGC
GTCTTCGAGC CGGCATATCA GGCGCGGCTT GCGGCGTTCG AGGCCTGGCT GCGGGAGCAG
CCCGGCGTCG TCAGCGTGGC CGCCATCTCC GACGTTACTG CCCGCGTGCA TGAGGCGATG
AATGCGGGGC GCGAGCCTGT CGAGGCGGTT CCGGAGGACA GGGAAACCAT CGCGCAGTAT
TTCCTGCTCT ACGAGCTGTC GCTTCCCTTT GGCATGTCGC TAAACGATCA GGTTAACGTA
AGCCGGTCGT CGAGCCGGGT TACGGTTATC CTGCGCCATA TGACGTCAAC GCAGATCCGC
GAGTTCAACG ACGGAGCGAC GTCATGGCTG AAAGAGAATG CGCCTCCGGA AATGCAAACA
CGGGGCATTG GCCTCAACGT TCTCTTCGCC AATCTCTCCG GGGTAAATAT CCGCTCCATG
ATGCTGGCGA CGCTCGTATC CGTCGTGCTG ATTGCGGTGG TCGTCGGCGT GGCGCTTCGC
AGTACTGTTT ATGGCGCGCT GAGCATCCTG CTGAACATGT TGCCGTCGCT TGTCGGCTTC
GGTCTCTGGG GGCTCTTGTA TCAGGACATA GGGCTCGCGG CCTCGGTCGT CACCGCCATG
ACAATCGGTC TGGTGGTGGA TGACACGATC TATTTTCTGT TGATGTATCA GCGCGCGCGG
AAAGACGGAC TTTCACCGGA AGAGTCCATT AATCACGTCT TCGCCACGGT GGGCATCGCC
ATGCTGGTCA TCACCGCTTC CCTGGCTGTC GGCTTTGGCA CACTGGTATT TTCGGGCTTT
GAGGTGAACC GTTCGCTCGG TGCGATGACG GCTCTTGTCA TCTTGTCCAA CCTCTTCATC
GACTGGTTGA TGCTTCCACC GGTGATGAGG ATTATGGAAA ACAGCCGGGC AAGGAAGGCT
GCGCGTCGTC TATCATAG
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| Protein sequence | MRKSKNPALR FPRTTIALCL AVCIAAALGV FQFKLSYDTR VFFNPAGQDI ATLRGFEAKY
GQNNDLLMVV WAGGRDIAEP DTLAAMGDLV ARAWRLPHST RVDGLTNFPH VQSDADSFSV
ADLVPDPANV SLAEAQEIGR IAIDDPLIRN RLMAEDGKAA GIVVNFNLPG EASAEVREII
AAARALAKDF EADYPGIEVK LTGNVMLMGT FSEAAMNDVM VLIPISLLVT SLVMFAFVRA
VLPSIGILSL LGLSSAAAMG AAGWYGYEIN TATVACPVII MTVNMAAAVR IVTTAMGALG
RGLSRNEAIA EAISINLWPV TLTNATTMIG FLAMNLADAP PLREQGNIVV VGILFAYLFT
FTWLPAILSL MPLRPAVQRS ERVMILLGHF VNRYYKQLFF LCSMIVLACA VWLGNIRLDD
DFARYFDQRF EYRQDSDFAE ERLTGLNIVE FDVGAGTEGG VFEPAYQARL AAFEAWLREQ
PGVVSVAAIS DVTARVHEAM NAGREPVEAV PEDRETIAQY FLLYELSLPF GMSLNDQVNV
SRSSSRVTVI LRHMTSTQIR EFNDGATSWL KENAPPEMQT RGIGLNVLFA NLSGVNIRSM
MLATLVSVVL IAVVVGVALR STVYGALSIL LNMLPSLVGF GLWGLLYQDI GLAASVVTAM
TIGLVVDDTI YFLLMYQRAR KDGLSPEESI NHVFATVGIA MLVITASLAV GFGTLVFSGF
EVNRSLGAMT ALVILSNLFI DWLMLPPVMR IMENSRARKA ARRLS
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