Gene Plav_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1092 
Symbol 
ID5455721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1196643 
End bp1197818 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID640876662 
Producthypothetical protein 
Protein accessionYP_001412370 
Protein GI154251546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGAAA GCCCGCAGAC AAGACGGAAA CGCATGAAGG CGAACGAGCT CTTTTCCGAT 
ACCTATGTGG AGGCGCGGGC GCAGTTTCTG GCTGCGGCGG AGGCGGCCGG CGGCCGGCTG
CGGCACTATG AAAACCAGCA TGCCAAGGGG CCCGGCGAAA CCAGACTTTT CACCGATACC
GCATGGTTCG GACCGGCAAA TGCGGAGACG GTGCTGCTGA ATACATGCGG GACGCATGGC
GCCGAGGGAT ATGGCGGCTC GGCGGTGCAG ACGGCGTGGA TCCGGGAGGG CGGCCCTGCT
TCGCTGCCGC AGGGCGTTGC GGTGCTGCTG GTGCATGCGG TGAACCCTTT CGGCTTTGCC
TGGGGCCTCA GGGGCACGGA AAACAACGTC GATGTGAACC GCAATTTTCT CGACCATACA
AAGCCGCACC CAGAGAATCC GCTTTACGGC GAGCTTCATC CCCTTCTCTG CCCCACCACG
CTGGACGACG ATGCCGTGCA GAAGATGCTG ACAGGCGGCG CACGCTTCAT CGAGCGTCAC
GGACAATGGG CGCTGGAAGA TGCGATAAGC CGCGGCCAAT ATACGCATCC GGACGGCTAT
CATTTCGGCG GGACGGCGCC TGAGTGGTCG AACCTCACCA TGCGGGAAAT CGTGGCGCGC
GAACTGCCGC GCACGCATCG CGTGGGATTT ATCGACTGGC ATTCGGGGCC TGCGGGCGAC
GGAGAACTGA TCTATCTCTG TTTCTCCGAT CCGAAGGGAC CGGGTTTCGC GCGAGCCTCG
CACTGGTGGG GTCGCGAGGC GCTCGATCCA AAAACAGTCG ATGCCATGTG GGGTTCCAAG
CGGCCGACGC GGCGGGGCAT CATGTTCTGG GGCATTGAGG AAATGCTTGC CGGGCAGGCG
CATTTCAGCG GCGCTGTCGT GGAGTTTCGT TCGGCACAGG TGAAAACCAA TGCGGCGAAA
GCCATGCGCG TGCCGATGCT CGAGCGCTGG CTGCGCTTTG TCGGCGGCTT CGACGCGCCG
GAAGCGCCGG GCTATTTCGA GGAGATCCGC GACGACTATG CGCCGCGCCG GAAATCCTGG
CAGGAAAATG TGCTGATGAA CGGGCTCGCC TGCTACGACC GCACCATTGC CGGCCTCGGC
GACTGGGCGC GCGAAGGGCT GAAAGCAGCC GACTGA
 
Protein sequence
MAESPQTRRK RMKANELFSD TYVEARAQFL AAAEAAGGRL RHYENQHAKG PGETRLFTDT 
AWFGPANAET VLLNTCGTHG AEGYGGSAVQ TAWIREGGPA SLPQGVAVLL VHAVNPFGFA
WGLRGTENNV DVNRNFLDHT KPHPENPLYG ELHPLLCPTT LDDDAVQKML TGGARFIERH
GQWALEDAIS RGQYTHPDGY HFGGTAPEWS NLTMREIVAR ELPRTHRVGF IDWHSGPAGD
GELIYLCFSD PKGPGFARAS HWWGREALDP KTVDAMWGSK RPTRRGIMFW GIEEMLAGQA
HFSGAVVEFR SAQVKTNAAK AMRVPMLERW LRFVGGFDAP EAPGYFEEIR DDYAPRRKSW
QENVLMNGLA CYDRTIAGLG DWAREGLKAA D