Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1077 |
Symbol | |
ID | 5453513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1181925 |
End bp | 1182461 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876647 |
Product | hypothetical protein |
Protein accession | YP_001412356 |
Protein GI | 154251532 |
COG category | [S] Function unknown |
COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCG CAGCAGGTTA CCGAACACCG GATAGCGCGG ATGTGATGGC GGAAGCCGAT GCCCATGGCA TCGCCTTCAG GCGTCTCAAG GAGCTGCGTG AGCCGCTGTG CCGCGACATG CTGGCCTATT GGAACGAGAT CCGCGAAGGC CGCTCGATGC CGCGCCCCGA CGAAATCGAC CCCGTCCGGT TCGCCCGGTA CATGCCTAAC CTGCTCATGG TGCAGGTCAA TTGGCAGCCC TTCGATCTGA CCTATCGCCT TCTCGGCGGT GAAGTGGTCA ACGCCCACGG CGCGAACTTC CGTGGCCGTC GCGTGCTCGA TTCCCCGTCC CACACGGGCC GGTTCAATGA GGTGCTCTTC GCTTTCTACA AGTTCGTCGC GGGGGAAAAG CGCCCTTATG CCGTCTGCGG CACGATGGAA TACGTCGCCA AGGGTCCCGT CGAGGTGGAA GCCGTCTACC TGCCGCTCTC GCTTGACGGT TCTTGCACGG ACCGCATTTT AGGTGCCGTC GTTTCCCGCC CGCTACCCGG CAAATAG
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Protein sequence | MQIAAGYRTP DSADVMAEAD AHGIAFRRLK ELREPLCRDM LAYWNEIREG RSMPRPDEID PVRFARYMPN LLMVQVNWQP FDLTYRLLGG EVVNAHGANF RGRRVLDSPS HTGRFNEVLF AFYKFVAGEK RPYAVCGTME YVAKGPVEVE AVYLPLSLDG SCTDRILGAV VSRPLPGK
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