Gene Plav_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1077 
Symbol 
ID5453513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1181925 
End bp1182461 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content63% 
IMG OID640876647 
Producthypothetical protein 
Protein accessionYP_001412356 
Protein GI154251532 
COG category[S] Function unknown 
COG ID[COG5388] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG CAGCAGGTTA CCGAACACCG GATAGCGCGG ATGTGATGGC GGAAGCCGAT 
GCCCATGGCA TCGCCTTCAG GCGTCTCAAG GAGCTGCGTG AGCCGCTGTG CCGCGACATG
CTGGCCTATT GGAACGAGAT CCGCGAAGGC CGCTCGATGC CGCGCCCCGA CGAAATCGAC
CCCGTCCGGT TCGCCCGGTA CATGCCTAAC CTGCTCATGG TGCAGGTCAA TTGGCAGCCC
TTCGATCTGA CCTATCGCCT TCTCGGCGGT GAAGTGGTCA ACGCCCACGG CGCGAACTTC
CGTGGCCGTC GCGTGCTCGA TTCCCCGTCC CACACGGGCC GGTTCAATGA GGTGCTCTTC
GCTTTCTACA AGTTCGTCGC GGGGGAAAAG CGCCCTTATG CCGTCTGCGG CACGATGGAA
TACGTCGCCA AGGGTCCCGT CGAGGTGGAA GCCGTCTACC TGCCGCTCTC GCTTGACGGT
TCTTGCACGG ACCGCATTTT AGGTGCCGTC GTTTCCCGCC CGCTACCCGG CAAATAG
 
Protein sequence
MQIAAGYRTP DSADVMAEAD AHGIAFRRLK ELREPLCRDM LAYWNEIREG RSMPRPDEID 
PVRFARYMPN LLMVQVNWQP FDLTYRLLGG EVVNAHGANF RGRRVLDSPS HTGRFNEVLF
AFYKFVAGEK RPYAVCGTME YVAKGPVEVE AVYLPLSLDG SCTDRILGAV VSRPLPGK