Gene Plav_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1037 
Symbol 
ID5455374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1138862 
End bp1139353 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID640876607 
Productdehydratase 
Protein accessionYP_001412316 
Protein GI154251492 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCG AACCATCATC AAAAGGACAC AGCGAGGCGC AAATCGGGCG GGGCCTGTTC 
TGGCATGACA TGCACATCGG TACGACGCTC CGCACATATA CGCGCACGAT AACGGAGACC
GATCTTGTCA GCTTCGTGAC ACTTACCGGC ATGATCGATA GCGGCTTTCT CGATGCGACG
ATTGTCGGGC CAATGGGCGG ACGTCCTGTG CCCGGCGCGC TGACCTATTC GATCATCGAA
GGCTTTATCG TCCAGTCCCT CATCCGCGGA ACCGGCATCG CGATGCTCGG CTGCACGCAG
GAGGCAATAG CGCCGGTCCA TGTCGGCGAT ACAATCTACG CAACTATCGA GTTTACCGGC
GTGCGCCCGA CATCCCGAGG CAATCGCGCG GTCGTCGACT CGGCGATCAC CATCTTCAAT
CAGCTTGATA AGCCGGTACT GCGTTATACC TCGCGGCGGA TGATCGCGGG ACGTCCGGAA
GCGGTGGAAT AG
 
Protein sequence
MPFEPSSKGH SEAQIGRGLF WHDMHIGTTL RTYTRTITET DLVSFVTLTG MIDSGFLDAT 
IVGPMGGRPV PGALTYSIIE GFIVQSLIRG TGIAMLGCTQ EAIAPVHVGD TIYATIEFTG
VRPTSRGNRA VVDSAITIFN QLDKPVLRYT SRRMIAGRPE AVE