| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1033 |
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| Symbol | |
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| ID | 5456734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1132773 |
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| End bp | 1133690 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640876603 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001412312 |
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| Protein GI | 154251488 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGATC GACGTCTCGT TTATGTTGTT TCCACTGCAC GGTACGGGTC CTTCACCGCC
GCTGCGGATC GCGTAGGTGT GACTCAATCA GCGATTACCA AGAGTGTGGC GGACCTGGAG
CGGGAGCTCG GCTATTCGAT CTTCAATCGA ACCGCGCGTG GCGTCCTCTT GACCGAAGAA
GGGCGCTCTT TCGTTGAACG AGCATCACGT CTGCTGGACG AAGCGCAAGA CCTGCTGCAA
GGCGCATCGA CAGGATCGGA TCCCTATGCT GGTGTGCTCA GAATCGGCGT CTGTCCTTCT
TCGCTCGAAT GGTTGCTTGT GGAACCGTTG TCGACGTTGA TATCACGACA TCCAAACATC
CGACTGCATA TTAGCGGGGG CACTTACGAC GGAATCGTGC AACAGCTGCG CGTCGGCGCG
ATCGATGTGG CTCTCGGATA TGAAGCAGCC TTTCAGGAGC ATCCCGACTT TCGGCGAGAG
CCGATGGCGC CTCTGCAAAC CATTTTCTTT GCGCGGAAGG GACATCCTAT TCTCGACTGC
GATGAGGTGA CGAAAGCAGA GATCGCCAAA TACGATCTGG TCGTACCCTC AGGCTGGTCA
CCTTACAACT TTGTCTGGCG CCAAATTTAC GAAGATTCGG GCGTCGATTT TCCTGACCGA
CCACACATTG TCGATTATTT CCCGATCGTC ACGAAACTGG TGCGTAATTC CGATGCCATC
AGCATTGCCG CGATCCACTA TACGCGTACC AGTGTTTTCA AAAGACATTT CGAGCGCGTG
CCCGATCTTG ACCTGCTGAC ACCGTCACCG CTCTGTTGCG CAACGCGGCT CCGCTGGAAT
CCGCGCCCAG CGGTTCGCGC TTTTATCAAG GCCTGCCGCG AACGCCTGCC CTCATCAGAA
ACAATCCCCC GCACCTAG
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| Protein sequence | MIDRRLVYVV STARYGSFTA AADRVGVTQS AITKSVADLE RELGYSIFNR TARGVLLTEE
GRSFVERASR LLDEAQDLLQ GASTGSDPYA GVLRIGVCPS SLEWLLVEPL STLISRHPNI
RLHISGGTYD GIVQQLRVGA IDVALGYEAA FQEHPDFRRE PMAPLQTIFF ARKGHPILDC
DEVTKAEIAK YDLVVPSGWS PYNFVWRQIY EDSGVDFPDR PHIVDYFPIV TKLVRNSDAI
SIAAIHYTRT SVFKRHFERV PDLDLLTPSP LCCATRLRWN PRPAVRAFIK ACRERLPSSE
TIPRT
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