Gene Plav_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1028 
Symbol 
ID5456555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1127442 
End bp1128284 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID640876598 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412307 
Protein GI154251483 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT ATCAGAATAT CCTTGTCGAT GAACCCATCG AAAAAGTCCG GCGCATCACT 
CTCAATCGCC CGCAAAAGCG CAATGCCTTG AGCAACGCTT TGCGAAGCGA ATTGTTTGCT
GCGCTTGAGG CCACCGATCG GGACGACGGC ATTTCCGTCG TGATCCTTCG TGGAGCCGGA
CCTTGCTTCT CTGCAGGCTA CGATCTCGCT TCGGATACCC GGCAAGACCA GCCCTTCTAC
ACGGCAGGGG GCCTCGGCAA CTGGCCGCGG CATGTCGTTG AAGGTGGTTT TCGGATTTGG
GACCTGGCAA AGCCGGTCAT CGCCCAGGTC CATGGGCACT GCCTGGCGGG TGGCTCCGAA
CTCGCTGCCT CTTGCGATCT AGTCTATGTG GCCGAGGACG CAAAGATCGG TTATCCGGCG
GTACGATCGA TCAGTCCCCC GGACAACCAG TTTTATCCGT GGGTGATGGG TATGCGCAGG
GCTATGGAGC TCATGCTTAC GGGCGATGCA ATGTCAGGAT CGGAAGCCGC CGCCTATGGC
TTCGCCAATA GGTCCTTTCC GGCTGACATG TTGGAAGCCG GCGTGCTGGA TATGGCCGCC
CGCGTCGCAA AAATCCCCTC CGACCTTCAG CAGATCAACA AGCGCTCAGT CCATCGGCAG
ATGGAAGCCA TGGGAATGCG CCAAGGGATA CGGGCCGGGA CGGAGATGCA AGCATTGGCG
ATGGCGACGG AGACGACAAA GGCTTTCATC GCGCAAGTCC AAGGTCAGGG CCTGAATACT
GCGCTGACGA ACAGGGACTC GACGTTTGGC GATGGCAGAA CGGCTGCAAC GCCTACCAAG
TAG
 
Protein sequence
MTEYQNILVD EPIEKVRRIT LNRPQKRNAL SNALRSELFA ALEATDRDDG ISVVILRGAG 
PCFSAGYDLA SDTRQDQPFY TAGGLGNWPR HVVEGGFRIW DLAKPVIAQV HGHCLAGGSE
LAASCDLVYV AEDAKIGYPA VRSISPPDNQ FYPWVMGMRR AMELMLTGDA MSGSEAAAYG
FANRSFPADM LEAGVLDMAA RVAKIPSDLQ QINKRSVHRQ MEAMGMRQGI RAGTEMQALA
MATETTKAFI AQVQGQGLNT ALTNRDSTFG DGRTAATPTK