| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1020 |
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| Symbol | |
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| ID | 5456428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1116417 |
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| End bp | 1117238 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876590 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412299 |
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| Protein GI | 154251475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.812094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG TGCAGGGGCG CACCGCATTC ATCACGGGCG GCGCAAACGG CATTGGACTG
GGCATCGCCC GAAGTTTCGC GCGTGCAGGT GCCAAATTGG CGTTGGCAGA TGTGGATGCT
GCCGCACTCG CGCGCGCTAA GGCGGAGTTG CGGGGCATGA CGCCGGTCGA GACCTATCAG
CTGGATGTCC GCGATCGCGA TGCCTACGCA TCGACAGCAG AGGCGGTTGA ACGCTCATTG
GGACCGGTGT CGCTGCTGTT CAATAATGCC GGCGTGGCCG GCGGTACTTC AGCCGGTAAA
CTCACCTACG AGTCGTGGGA CTGGTACATC GGCGTCAACC TCAACGGCGT CATCAACGGT
ATTCAGACGT TTCTTCCGAG AATGATTGAA CGGGGCGAGG GTGGGCATAT CGTGAATACG
GCTTCGGGCG CGGGGCTTGT CGCGACCACA TCGGGGGTGC TGTACACGAC CGCCAAGTTC
GGTGTGGTCG GGATGTCGGA GGCTCTCAAC CTCGATCTAG CGGCCGCTGG CGTTGGTGTC
AGCGTGCTGT GTCCTGGTCC AGTCGCGACC GACATCATCC AACGATCGGC AGCCGCTGCT
CCGACGACCG GAACGCCGTT GGCAGATGAA GAGAGACGGC AGGGCGCCGA ACGTATAGCT
GAAGCGATTG AATATCTGAA TCAAGGCGTC AGTATCGATG ATGTGGGTGA GATGGTACTC
AAGGCGGTTC GCGATAATGC GCTCTACGTT CACACCGATC GCAGCGCGGC GAAACTGATC
CAGGTCCGGA CCAAAGCTCT TCTCGACGCC ATGCCTGACT AG
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| Protein sequence | MTDVQGRTAF ITGGANGIGL GIARSFARAG AKLALADVDA AALARAKAEL RGMTPVETYQ
LDVRDRDAYA STAEAVERSL GPVSLLFNNA GVAGGTSAGK LTYESWDWYI GVNLNGVING
IQTFLPRMIE RGEGGHIVNT ASGAGLVATT SGVLYTTAKF GVVGMSEALN LDLAAAGVGV
SVLCPGPVAT DIIQRSAAAA PTTGTPLADE ERRQGAERIA EAIEYLNQGV SIDDVGEMVL
KAVRDNALYV HTDRSAAKLI QVRTKALLDA MPD
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