Gene Plav_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1018 
Symbol 
ID5456591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1113770 
End bp1114663 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content60% 
IMG OID640876588 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412297 
Protein GI154251473 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGG AAGGCGTCGA ATACGAGCAG GTGATCTATG AAATGCCGGC TCCCAAGGTG 
GCGCGGATCG TGATGAACCG GCCCAGTCGG CGCAACGCGC AGGGCATCAC AATGACGTAC
GAACTGGACG ACGCGTTCAA GCGAGCCTGT CACGACGAAC AGATCAATGT GATTATCCTC
GCCGCCTCCG GCGATCATTG GAACTCAGGC CATGACGTCA GTGGAGAGGG ACCGCGCAAC
CCCTCGCTAG AGCAGGTCAC CGGGCTTTGG AGCGACTACG GTGGCAAGGG CTGGGATGGT
CCCTACGGTC GCGAGAGGGA AATCTATCTT GAGATCACCG AACGCTGGCG CAATGCGCCG
AAGCCGGTAA TCGCGGAAAT CCAGGGGTCC GTGATCTCGG GCGGAATCAT ACTGACCTGG
ATGTGTGATC TCATCGTCTG CTCGGAGGAA GCGCGCTTTC GTGACGCCAC CGCAGCGGAG
ATGGGCATTC CTGGCGTGGA GTTCTGGCAG CATCCCTACG AGATGAGCGT CCGTCAGGCG
AAGGAATGGT TGATGACCGG CGGTTGGATG ACTGCGCAGG AAGCTGAACG GCGGGGCATG
GTCAACCATG TCGTCCCGCG CGGGCAGTTG ACGGCGCGAA CGCTCGAGCT GGCCGAGACC
ATCGCCGCCC GGAATCCCTT CACCATGAAG CTAGTGAAGC AAGCAATGAA CTTCGCGCAG
GACCAAATGG GGCGCAAGGC AACGGTGGAC TTTGCTTTTC ATCTTCACCA GATCGGGCAT
ATGCAGGCGA TGCTCACCAA TGGGATTCCG ATCGACATCG ATAGCATGCC CCCTGCGATG
CGCGCGACCA TCAATAAGGC GCTAGCTGCG CGTGAAACTG CATCTGCAGG TTAG
 
Protein sequence
MAAEGVEYEQ VIYEMPAPKV ARIVMNRPSR RNAQGITMTY ELDDAFKRAC HDEQINVIIL 
AASGDHWNSG HDVSGEGPRN PSLEQVTGLW SDYGGKGWDG PYGREREIYL EITERWRNAP
KPVIAEIQGS VISGGIILTW MCDLIVCSEE ARFRDATAAE MGIPGVEFWQ HPYEMSVRQA
KEWLMTGGWM TAQEAERRGM VNHVVPRGQL TARTLELAET IAARNPFTMK LVKQAMNFAQ
DQMGRKATVD FAFHLHQIGH MQAMLTNGIP IDIDSMPPAM RATINKALAA RETASAG