Gene Plav_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1007 
Symbol 
ID5456306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1101424 
End bp1101900 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content64% 
IMG OID640876578 
Producthypothetical protein 
Protein accessionYP_001412287 
Protein GI154251463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.198465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGATA TTGCCATTGC CCGTGCTCTC CATGTTCTCG CGTTGGTTCA CTGGATCGGC 
GGCGTGACGC TCGTCACCCT CGTGATCCTA CCAGCCGTCG CACGTTTCTC CGAACCGCAA
CGCCGCGCGG CGTTGTTCGA GGAAATCGAA GGCCGCTTTG CCTTTCAGGC GAAAATCGCC
GTCACGCTGG CAGGCCTCAG CGGCTTCTAC ATGACCTGGC GGCTCGAGGC ATGGGACCGC
TTCGGGGATC CCGCCTTCTG GTGGATGCAT GCGATGCTGC TTGTATGGGC GCTCTTCACC
TTCGTCCTCT TCGTCGCCGA GCCGCTTTTC CTTCACGACT GGTTTCGCCG CCGCGCCGCC
CGCGATGCGG AGAGCACCTT CGCGCTGGTG CTCCGCTTTC ACCGCGTCCT GCTGACGCTC
AGTCTCCTGA CGATTGCGGG CGCGGTGCTG GGCGGCCATG GCAGCTTCCT GTTCTGA
 
Protein sequence
MDDIAIARAL HVLALVHWIG GVTLVTLVIL PAVARFSEPQ RRAALFEEIE GRFAFQAKIA 
VTLAGLSGFY MTWRLEAWDR FGDPAFWWMH AMLLVWALFT FVLFVAEPLF LHDWFRRRAA
RDAESTFALV LRFHRVLLTL SLLTIAGAVL GGHGSFLF