| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0999 |
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| Symbol | |
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| ID | 5456677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1080333 |
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| End bp | 1081280 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876570 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001412279 |
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| Protein GI | 154251455 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.913515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.929233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATCC GCGAACTGGA TCTGAACCTG TTGCTCGTGT TCAACGCGAT CTATACGGAA
CGAAGCATCA GCAAGGCCGC CGTGAAGCTC GGCATAACGC AACCCGCCGT TAGCAATGCC
CTGCGCCGGT TGCGTAACTT CACGGGCGAC ACGCTATTTT ACAAATCCGG CTCCGGCGTC
GCCCCCACGC GGGCGGCGGC AACGCTTGCC ATTCCCATCG GTCATGCGCT CGACACAGTG
GAGAGAGGCC TCTCCTCGGT GCGCAGCTTC GATCCCGCTA CCTCCCGGCG CACATTTCGC
ATCGGCGTGA ACGACATTAT CCACGACGCT CTCGTGCCCG CTCTCGTCGG CTATACAAGA
CGGGAAGCGC CAAACCTCAT CCTAGAGTTC GTGCAGCAGG TCGGCGACCG TGCCCTTGAA
ATGCTGAAGG GCGGCGAAAT CGACATGGCG CTGCTCCCTA ACTTTGCAAT CGACGACAGC
CTCGTTTCCA CAAAGGTGTG GGACGATTCC TTCGCCATTA TCGTTGCGCG GAATCATCCG
ATCGCCAAAA GCAACAGGCT GACGGTCGAC GACATCCGGG AGTTGCGCTT TGTTGTCACC
ACCCATGTAC AGAGACTGCG CACCTTCATC GACAGTGCCT TCAGGGCAAA TGGGATGGAA
CGCGTCACGG CCTGCGCGGT CGCCGATACG CACAATATTT ATCCCCTCGT CGCCGTTTCC
GATCTGGCCG CCTGTGTGGG CCGCTTCCAC GCCGACCGCT ACAACACGGA TGGGAGCCTG
GTGATGTTCG ATCTGCCGTT CGAACTGCCG AAAATACAGG GACGCATCGC CTGGGCGAAA
GAAGCCGATG AAGACGAGGG ACATCGCTGG GTGCGTGAGC GCGTTCTTGA AATCCTGCAC
AGCGCCTTCA AGCTGCACGG AGCCAGAGAG CCATCAAGCG CCCTGTAG
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| Protein sequence | MNIRELDLNL LLVFNAIYTE RSISKAAVKL GITQPAVSNA LRRLRNFTGD TLFYKSGSGV
APTRAAATLA IPIGHALDTV ERGLSSVRSF DPATSRRTFR IGVNDIIHDA LVPALVGYTR
REAPNLILEF VQQVGDRALE MLKGGEIDMA LLPNFAIDDS LVSTKVWDDS FAIIVARNHP
IAKSNRLTVD DIRELRFVVT THVQRLRTFI DSAFRANGME RVTACAVADT HNIYPLVAVS
DLAACVGRFH ADRYNTDGSL VMFDLPFELP KIQGRIAWAK EADEDEGHRW VRERVLEILH
SAFKLHGARE PSSAL
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