| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0995 |
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| Symbol | |
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| ID | 5457003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1077735 |
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| End bp | 1078361 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876566 |
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| Product | TonB family protein |
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| Protein accession | YP_001412275 |
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| Protein GI | 154251451 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACGC TTGATTTTCG TGAAGGACAT CCGTCGTCGA GCCGCGTTGT CGGGCTTGCG
GCGGTCATCG GCCTGCATCT TCTTTTGTTG TGGGCACTGC TGAGTGGCCT CGCGCGCGAC
GTCGTGGAGG CTGTCCAGGA GCCCCTTCAG GTCGCGTTGA TCGCAGAAGC ACCGAAAGAA
GCGCCGCCCG CGCCTCCGCC CCCCGAAATC GTGAAGCCCC CCGAGGCATA TGTGCCGCCG
CCGGTGGTGA AGAAGGCCCC GCCGCTCACC CCGCAGAAAA CCATCCAGCA GGTGCAGCCG
GCGAAGCCGG AGCCGCAGCC GGTCGTTGCA GAGCAGAGGC CTATATTGCC TCGCGCCGAT
CCGAGCCACG GCAACACGCA GCCGCCTTAT CCGCCCGCCT CGCGGCGCAT GGGCGAGGAA
GGCCGCGTGA TCCTTCTTCT CTACGTTTCG GAAGACGGCC GCGTGACCGA CGGGAAGATC
GACAAGTCGA GCGGCTTCGA GCGCCTCGAC AAGGTTGCGC TGGTTCATGC GCGGCGTACC
TGGCGCTTCC TGCCGGCGAC GAAAGACGGA GCGCCGGTGG GGCATTGGAT GAAGTTCGCC
GTGAACTTCA AGCTGACCGA CGGCTAG
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| Protein sequence | MSTLDFREGH PSSSRVVGLA AVIGLHLLLL WALLSGLARD VVEAVQEPLQ VALIAEAPKE
APPAPPPPEI VKPPEAYVPP PVVKKAPPLT PQKTIQQVQP AKPEPQPVVA EQRPILPRAD
PSHGNTQPPY PPASRRMGEE GRVILLLYVS EDGRVTDGKI DKSSGFERLD KVALVHARRT
WRFLPATKDG APVGHWMKFA VNFKLTDG
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