| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0992 |
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| Symbol | |
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| ID | 5454752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1075044 |
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| End bp | 1075718 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876563 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001412272 |
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| Protein GI | 154251448 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGCGG TGATGAACAA CGACCCGGTC ACTACCGGTC TGGATGGGCT CGCGGATTGG
ATCGGTCCGA AGCGAACGGC GCTTTGCATC ATCGACATTC AGGCCGACTT CGCGGCGCCC
GATGGCCTTA TGGCGAGCTT CGGCGTCGAT ATGAGCAGCG TGCCGGAAGC CATCGCGAAT
GCGGAAAGGC TCATCGCCGC CGCGCGTGAG GCGGCTGTGC CGGTGATCTT CATCGGCCTC
GAAACCAGCG CCGAAACGGA TTCACCCGTC TGGACAGAAC GAATGCGCCG CCGCGATGGC
GATCCCGAAG CCGAAAGCAA TGTCTGTCGT GCGGGTACAT CGGGTGCGGC CTTCTACGGA
CCCCAGCCCC AACCGGGCGA CGTCGTAGTG ATGAAGCCGA AATACAGCGC CTTCCACGCG
ACGTCCTTTT CCAGGGTTCT CGAAGAGAAG GGCGTCGATA CGCTCGTTGT CTGCGGCCTC
ACGACTGAAT GCTGCATCGG CAATACGGTG TCCGACGCAT TCCATCGCGA CTACCACGTC
ATTATCGCTG ACGATGCCTG CGCCGCTTAT GGCGAAGATA TTCATCGCGC CGCCATTGCC
ATACTCGAAC TCAACTGCGC CATCTTGCGC AGCACAGCGG AAATCGAAGC CGCATGGAGC
AAGGCTCATG GCTGA
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| Protein sequence | MNAVMNNDPV TTGLDGLADW IGPKRTALCI IDIQADFAAP DGLMASFGVD MSSVPEAIAN
AERLIAAARE AAVPVIFIGL ETSAETDSPV WTERMRRRDG DPEAESNVCR AGTSGAAFYG
PQPQPGDVVV MKPKYSAFHA TSFSRVLEEK GVDTLVVCGL TTECCIGNTV SDAFHRDYHV
IIADDACAAY GEDIHRAAIA ILELNCAILR STAEIEAAWS KAHG
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