| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0989 |
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| Symbol | |
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| ID | 5455730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1070065 |
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| End bp | 1072539 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876560 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001412269 |
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| Protein GI | 154251445 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.829693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.277398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC AACATTACCT CGATACCACC TCGCGCCTGG CCTTGGTTGT CATGGTTGCC
GCGCTGATCG TGCCTGTGGG CACGCATGCG CAGGAAGTGG TGGATGACGA CGTCCCGGTG
ATAGAGCCGT CGCCGGCTGA AACTTCCGCT CAGGTCAAGG AGATGACTGT CGTCTCCGAG
CGTGACAAGG CGGGTCTACT GGAGCAGCAG CCAAGCGATC TGCTGTTCGG CATGAAAAAG
CCGCTGCTGG AAACGCCGAG ATCGGCGACC TTCGTCAGCG AGGAAACGCT GAGCACCTAC
GGCGTCACGA CGGTTGACGA CCTCGCCGCG GTGTCACCCG GCACCTTCAC CTCCTCCTTC
TACGGCGTTG AAGGCGCGCT CAACGTGCGC GGTCTTCTTG CGGAAACCTA TTTCCACGGC
TTCAAGCGTA TCGAAAACCG GGGCACCTAT CAGACGCCGC TCGGGGCCAC CTCCCGCATC
GACATTCTTC GCGGGCCACC CACGGCGAAC TTCGGCCCTG GCAAGGTAGG CGGTCTTCTT
AATCTGGAAC CCAAGACGGC GAAGATCAGC GAAGAGGCTG GTTACATGAC CGATGTGTCG
GGCCAGGTTA CAGGCACGCT CGGCTCGTAC GACAAGAAGA ACGGCAGCTT TGAAACGGGC
ATCCCGCTGA ATTTCGGCAA CACCGCCGGC GGTGTCTTCG TTTACGGTGA GATCGAGGAC
TCGGAAAGCT ATTATCGGGG AATCAAGCCC GAGCATCAGC TCCTGCAGAC CACCGCGCAG
TTCGAAACCA TGAACGGTTG GACCTATGGC GGCGGTGCCA TGTACTACCA ATCCGAAGGC
TATGTGCAGA CGCCGGGCTG GAACCGCGTC ACACAGGATC TGATCGACAA TGGCACCTAC
ATCACGGGCA CGAACTCCGG GCTCATTGAC GCCAATGGCA ACGGCTATAT CGACCGGGGG
GAGCTGCCAC CCGGCGGTCT TACCCACGCG CCGGAATGTT TCGGCGGCTG CGATGTTCCG
CTCGTTTATC GTCAGCTCGA CACCGGCGTG GGAACCACCA AACTCAGCAG CCGCGACGTC
TACACCAGTC CGTTCGACTT TTCGGATACC ACGACGCTCA CGCTCTATGG CGATCTGATC
AAGGCGTTTG ACGATGGCTC CGAGCTGAAG ATTCAGGCCT TCTACGACTC GCTCGATAAC
GAACGCTTCG TAAGCTATGG CTTCCCGGCC GACTACGATT CCTACACGGT TGAAGGTCGT
GTCAGCTACA ACTTCGACGT CAAGGTGCCG GACTCGCCTC TCACCGCTGC CTTCAACGTC
GGCGTCAGCC ATCGTTATTA TGACGCCCAG AAGAAAGAGT CCTTCAACTA TGGCGGTATC
GCGCTCGACA GGCGCGACAT CGCAAACGGG CCCACGCCGA CCGACACCCT CGGTTCGCCC
TTCTTGCCGG GCTCCGGCTA CACCTGGGAC TACAACAACA AGTCCACCTG GCACGATACC
GGCCTCTTCG CCATGGCCGA CTTCGACGTG GCCGACAAGC TCCTCGTCAC GCTCACCGGC
CGTTACGACT GGTACAGCGT CGACTCCGAA GACACGGGCT CGCTCTGCTT CTGCACCCCT
GGTCCGCAAT CCGACACAGA CAGCGCCTTC ACCTACAGCG CCATGGCTCT CTATAAGGGG
CCGTATGGCA TCCGGCCCTA CATCACCTAT GCGGAAACAA CGGCCATTGA GTTCGGCCAG
GCAGGCGACG TCTCGCCGAC CACCGTTGCC AATGGTGATT GGCTTTCCGA TGGCGATCTC
GTTGAAGCGG GTATCAAGCT CGAAGCCTTC GATGGCGTCC TCACCGGCGC ACTGGCGGCC
TACCGCCAGC ATCGCACTGT GCTCGACAAT GTCGGTGGCG GTGTCGACGA AACGGAAGGC
CAGGGCGTCG AGCTTGAGTT GCGTTATCTG GCGACCGAGA ATCTCAGCTT CACCTTCGCG
GGCAACGTCC AGAAGACGAA GTTTCTCGGC AGCTACGACG CCTTCTACTA CTTCACGCCG
GCGACCTTCG GCTACAACCC GGCCGATTAT TATGGTGCTG GCCTCGTGGG ATACTCCTTC
AGCGGCATCG CGGCCATCAC CGGCGACAGC TACTACGCCG GGGAGATCGA GGACCGTCGC
ATCCCCGAAA AAGTGCTGAG CCTCTTCGGT ACCTACACCA CCGATCAGTA TGGCTGGGGA
CATGCCGGCA CCACCTGGGG CGTGCGTTAC GTCTCCGAGA CAGCGGGCCT TGCCTCCGAT
CCTGTGAGGT ATCCGGACTA CTTCCTCGTC CAGGCCTCAG CCTATGCCGA TCTCAAGAGC
TGGCGCATAG CGCTCAACGT CGACAACGTT TTCGACGAGG AATATTTCAC GCCCCTTCAG
GACCTCTACG GCGACGTCGC CGTGTTGCCC GGCAAGGGAC GCGAATGGCG TGTGACGGCG
ACCTACCGCT TCTGA
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| Protein sequence | MSKQHYLDTT SRLALVVMVA ALIVPVGTHA QEVVDDDVPV IEPSPAETSA QVKEMTVVSE
RDKAGLLEQQ PSDLLFGMKK PLLETPRSAT FVSEETLSTY GVTTVDDLAA VSPGTFTSSF
YGVEGALNVR GLLAETYFHG FKRIENRGTY QTPLGATSRI DILRGPPTAN FGPGKVGGLL
NLEPKTAKIS EEAGYMTDVS GQVTGTLGSY DKKNGSFETG IPLNFGNTAG GVFVYGEIED
SESYYRGIKP EHQLLQTTAQ FETMNGWTYG GGAMYYQSEG YVQTPGWNRV TQDLIDNGTY
ITGTNSGLID ANGNGYIDRG ELPPGGLTHA PECFGGCDVP LVYRQLDTGV GTTKLSSRDV
YTSPFDFSDT TTLTLYGDLI KAFDDGSELK IQAFYDSLDN ERFVSYGFPA DYDSYTVEGR
VSYNFDVKVP DSPLTAAFNV GVSHRYYDAQ KKESFNYGGI ALDRRDIANG PTPTDTLGSP
FLPGSGYTWD YNNKSTWHDT GLFAMADFDV ADKLLVTLTG RYDWYSVDSE DTGSLCFCTP
GPQSDTDSAF TYSAMALYKG PYGIRPYITY AETTAIEFGQ AGDVSPTTVA NGDWLSDGDL
VEAGIKLEAF DGVLTGALAA YRQHRTVLDN VGGGVDETEG QGVELELRYL ATENLSFTFA
GNVQKTKFLG SYDAFYYFTP ATFGYNPADY YGAGLVGYSF SGIAAITGDS YYAGEIEDRR
IPEKVLSLFG TYTTDQYGWG HAGTTWGVRY VSETAGLASD PVRYPDYFLV QASAYADLKS
WRIALNVDNV FDEEYFTPLQ DLYGDVAVLP GKGREWRVTA TYRF
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