Gene Plav_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0955 
Symbol 
ID5456547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1028816 
End bp1030201 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content61% 
IMG OID640876526 
Productglutamine synthetase catalytic region 
Protein accessionYP_001412235 
Protein GI154251411 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC GGGAAAGACC GGGCCGTCAC GGCCGTGCAA CCTTGGGCGA GTTCAACGCC 
TTCCTCGCCG AGAATGGCGA AATCGACTAT CTCGACACGA TCTTCGTGGA CATGTGCGGC
ACGGTGCGGG GCAAGCGCTT CCCGTCCGAG GAGGCAGAGA AGGTTTTCAC CGACGGCGTG
CAGATGCCGC AGTCGCTCTA TTTCTTCGAT GTCACCGGCG TCAACGAAGA CATCCTCGGC
ATGGGCTTCT CGGATGGCGA TCCGGATCTC CAGTCGCATC CCGTCTCCGG CTCCATTGTT
CCCGTTCCAT GGGCGTCCAT GAAGCAGGCG CAAGTCCTGA TGACGATGGA AAACGACGAC
GGCACGCCGC TCATGCTCGA GCCGCGCAAT GTGCTCTCGG CGGTCGTCAA GAAGCTCGCC
GATATCGGCC TCCGCCCCAT AGCCGCTTGC GAATTCGAAT TCTACATCCT CGACAAGGAC
CTCGACCGCA AGGGCCGGCC GCAGGCGCCG ATCAATCCGG CGACTGGCTT GCGCGAAACC
GCGAACGAGG TCTATGGCAT CACCGAGCTC GACGGCTTCA TGGGTCTCCT GAAGGAGATC
GACGAAGCCG CCGCCGCTCA GGGTGTACCG GCTTCCGGCG CCACGGCGGA GTTCGCTCCC
GGCCAGTACG AGATCAACCT CAAGCATGAG AATGATGTCG TCCGGGCCGG AGATCATGCG
ATCATGCTGC GGCATCTGAT TGGCGCCATC GCCCGCAAGC ATAATTTCCT CGCGAGCTTC
ATGGCCAAGC CCTTTGTCGA TCAGACGGGC AACGGCCTTC ATGTCCATTG TTCCGTCGAA
GACGAGAACG GGCGCAACAT TTTCGACGAC GGCACGGATG ACGGCTCCGA CCGCCTGCGC
CATGCCATCG GCGGCTTGCA GGCAACCCTG CCAGATGCAA TGGCCCTCTT CGCGCCGAAC
CTCAATTCAT ATCGCCGCTT CGGACCGAAC CTCTTCGTGC CGGTCAACCG CACCTGGGGC
TACAACAACC GCTCGGTCGC CTTTCGCGTG CCCAATGGCT CGCCGGAATC GCGCCGCGTC
GAGCATCGCG TCTCCGGCGC CGATGCCAAT CCCTATCTGG TGCTCGCCGC CATCCTCGCC
GGCATCCACT ACGGCATCGT CAACGAGATT GACCCCGGCG AGCCCGCCGA AGGCAATGCC
TGCGAAATCA TGGACGAAGC CATTCCCTTC TACCTGCCAA GCGCCCTGAA GCGGTTTCGC
AACTCGGATG TGATGCGTGA ATATTTCGGC GACCTCTATG TCGACGTCTA CGCCGAAACC
AAGATGCTCG AATACGACAA ATTCCAGCGC GCGATTTCAC CGCTGGAGTA CGACTGGTAT
CTTTGA
 
Protein sequence
MSDRERPGRH GRATLGEFNA FLAENGEIDY LDTIFVDMCG TVRGKRFPSE EAEKVFTDGV 
QMPQSLYFFD VTGVNEDILG MGFSDGDPDL QSHPVSGSIV PVPWASMKQA QVLMTMENDD
GTPLMLEPRN VLSAVVKKLA DIGLRPIAAC EFEFYILDKD LDRKGRPQAP INPATGLRET
ANEVYGITEL DGFMGLLKEI DEAAAAQGVP ASGATAEFAP GQYEINLKHE NDVVRAGDHA
IMLRHLIGAI ARKHNFLASF MAKPFVDQTG NGLHVHCSVE DENGRNIFDD GTDDGSDRLR
HAIGGLQATL PDAMALFAPN LNSYRRFGPN LFVPVNRTWG YNNRSVAFRV PNGSPESRRV
EHRVSGADAN PYLVLAAILA GIHYGIVNEI DPGEPAEGNA CEIMDEAIPF YLPSALKRFR
NSDVMREYFG DLYVDVYAET KMLEYDKFQR AISPLEYDWY L