| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0947 |
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| Symbol | |
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| ID | 5453396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1020220 |
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| End bp | 1021818 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876518 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001412227 |
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| Protein GI | 154251403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.239668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGTC ACGATGCGAT CGTCATCGGA GCAGGGCTCA ACGGGCTTGT TGCCGCCGCC
AGTCTGGCGC GGGGCGGCCT TGATGTGCTG GTGCTCGATC GCGCTGCCGC CGCAGGGGGG
CTCTCCGCCG AATATGAAAT CGTGCCTGGG TTCCGCGTGC CGCGTTACAC GCTCGGCAGC
GGCGGCTTGC CCGCCCGCAT CGTCGCCGGT CTCGACCTGC CGCGCCACGG GCTCCGCTTC
GTCCGCGCCG AGGGCGGCGT CTCCTTCTTC CCAGATGGCG CTTACCATGC AGCTTATCGC
GATGGCGTTG TCCATCGCCG TGAAATCGCG CGCTTCTCGC GCCGCGACGC CGACGCCTGG
ACGCGGTACC GGCGGGATAT GTTGCGGGCG GCACGCGGGC TTGCCCCTCT CCTTGGCGGT
CCTGTTCGCG CACCCGTGAA AGGCTTCTTC GCCGGCCTTC GCGCACGTCT CGATCTCGCC
GACCGTATCG CCGCTATCGC CCCGGAAGAC CTTGCGGATA TGGTCCGCTT CTCGACGCTT
CCCCTTTCGG AGTTTCTCGA TTCATATTTC GAGTCGCCCG TCGTGAAGGC GCATCTCGCT
TCCGCCGCCC TCATGCGCGG CACGCTCGGC CCGTCCACGC CGACAGGCGC CTTTCGCCTT
GTCGTCCCCT GGCTCGCGGA AACGGGCGAT GCTATGGGAG GCGCGCCGGA AACGCTGCTG
CCCTATGGCG GCCCCGCCGC GCTTACAGGT GCGCTGCTCG CCGTCATCGC CGCCCATGGC
GGGCAGGTCC GCATGGAGGC GGAGGTAACC GACATTCTGA TGAAAGACCG GAAGGTGCGT
GGCGTCGTCC TCGCCAATGG CGAGGAAATC GGCGCGGGTG CCATTCTTTC GAGCCTCGAT
GTGAAGCGCA GCTTCCTCAG CCTCTTCCAG TGGAGGGACC TGCCCGAAGG TCTGGTGGAG
CGCGTCGGCC GCGTCCGCAT GAAGGGCGTC ACCGCGAAGG TCAATCTCGC GCTGGATGGC
TTGCCGGATT TCCCTTCGCT GCCGCATGGC TGCCCCTCCC TTGCAGGCGG CTTCCGTCTT
GCGGGCTACA TTCCGCAGAT GGAGCGCACC TTTTCCGACT GGCGTCACCG GATTCCGCCG
CGCGATCCGC TGGTCGAGGT GTTAATCCCC TCCTTGCATG ACGCGACGCT TGCGCCCGCC
GGCAAGCAGG TGCTCTCCGC GCTGGTCCAA TTCGTGCCCG ATGCGCTCCA CGAAGGCGCG
TGGAGCGGTG AGCGCCGTGA TGCACTAGGC GATCTCGTCA TTGCGCGCCT TGCCGAAGTA
AGCCCCGGCA TTGAAAAGCT CGTCCTGGCC CGCGAGGTCC TGCTCCCGAA CGATCTGGAA
GGCGAAATCG GCCTCACCGG CGGCGACATC GCTTATGGCG AAACGACACT CGATCAGATG
TTCATGAATC GCCCATTCCC CGGTATGGGC AGCGCGGAAA CACCGCTCGG GAATTTCTAT
CTTTGCTCGC CAAGTGCGCA TCCGGGGCCC CTCGTCCCGG GGGGTGCCGG CGCCAACGCC
GCCGCTCATC TTCTTGAGCG GCGGAAAGGA GGGCGTTGA
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| Protein sequence | MVRHDAIVIG AGLNGLVAAA SLARGGLDVL VLDRAAAAGG LSAEYEIVPG FRVPRYTLGS
GGLPARIVAG LDLPRHGLRF VRAEGGVSFF PDGAYHAAYR DGVVHRREIA RFSRRDADAW
TRYRRDMLRA ARGLAPLLGG PVRAPVKGFF AGLRARLDLA DRIAAIAPED LADMVRFSTL
PLSEFLDSYF ESPVVKAHLA SAALMRGTLG PSTPTGAFRL VVPWLAETGD AMGGAPETLL
PYGGPAALTG ALLAVIAAHG GQVRMEAEVT DILMKDRKVR GVVLANGEEI GAGAILSSLD
VKRSFLSLFQ WRDLPEGLVE RVGRVRMKGV TAKVNLALDG LPDFPSLPHG CPSLAGGFRL
AGYIPQMERT FSDWRHRIPP RDPLVEVLIP SLHDATLAPA GKQVLSALVQ FVPDALHEGA
WSGERRDALG DLVIARLAEV SPGIEKLVLA REVLLPNDLE GEIGLTGGDI AYGETTLDQM
FMNRPFPGMG SAETPLGNFY LCSPSAHPGP LVPGGAGANA AAHLLERRKG GR
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