| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0931 |
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| Symbol | |
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| ID | 5456525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 998098 |
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| End bp | 999477 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876502 |
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| Product | putative ribonuclease BN |
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| Protein accession | YP_001412211 |
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| Protein GI | 154251387 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.810596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATT CGGCTTCGCT TCTTGAGCGC GCGCATGCTC TCGTCTGGGA TCAACCCCTC
GCCGATCTGC CGATTTGGCA ACGCGGCCTC TATGTCGCTG CCCGCATCGG CTGGGCTGTC
ATACGGGACC TCCTGAGCGG CGCGTTGAGC CTTCGGGCGA TGAGCCTTGT CTACACAACG
CTTCTGGCCA TGGTGCCGGC ACTTGCCATC GCATTTGCCA TATTTCGCGC CTTTGGCTTC
GACAGTTACG TTGAAGCCGT CCTTACGGAC TTCCTTTCCC CGCTCGGCGA TGAGGGAACG
CAGATTACCC TGCAGATGAT GGAGTTCGTG AACCGGGTAA ACGTCAACAT TCTCGGCACC
GTCGGCTTCG CATTCCTGCT CTATACGGTG GTTTCGCTGA TCAACAAGGT GGAAGCCGCG
TTCAACAGTA TCTGGCGGGT CGAAGCGAGC CGCTCCCTGG CAAGACAGTT CACCGAGATC
GTGAGCATGA GCGTCCTCGG CCCTTTGCTG GTGCTGACCG TGTTCGGCAT CATGGCGGGC
GCCCTGTCCA ATTCCGCCAT TGGCGGCCTC GCGGACAACT GGCTGATCAG CTACATCATC
GAGCAATCGA GCCGGCTGGT TCCCTACGCC ATTGTGATCG CCGCCTTCAC CTTCATCTAC
CGGATGATCC CGAATACGCG GGTGCAGATG GATGCGGCTT TGGTGGGCGG CCTCGTCGCC
GGCGTGACCT GGGGTGCCGC CGGGTGGACC TTTGCAACTT TCGTGGTGAA GTCGGCCCAG
TACGTTGCAA TCTATTCGGC GTTCGCCAGC CTCGTCTTCT TCATGATCTG GCTATACGCC
GCCTGGATCA TTCTGCTCGG CGGCTGCTCG ATCGCCTTCT ACTATCAGAA CCGCGCCTAT
CTATCGCCCT ATGCCGGGGT CAGCCTGCTT ACGCTGCGCC AGTGCGACCG AATGGCGGTA
CAGGCTTTGC TGCTCGTCCA TGACGCCTTT GAACGGGGAC AAACGCCCTG GACCGAAGAA
GCTCTCGCGC GGCGGCTGCA TGTGCCCATG GAGGCGATGG CGGAAATTTC CGGCGCCTTG
TGCGAGGCAG GGCTGTTGAC CTTCGCGGCC GGCACGCCGA GCAAATTCGT CCCGACACGA
CCGGCGGACA AGACCTGTGT CGCCGATGTG CTCGCTGCCG TCCGCAAGAA GCGGTTCAGC
CGCAGCGTTA CAGACGATAC TCTCGCTCAC GAACCTCGTG TCGAAGCGCT GTTCGAAAAA
ATGGACGAGC AGCAGGCGAG GCTCGTGGAC CCGGTCACAA TTGCGTCACT GATGGCGGCG
GACGAAGCCG CGCCCGAGGT CGATGCTGGC GCCAAATCGT CCGCAACTCT CATACGTTAA
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| Protein sequence | MFNSASLLER AHALVWDQPL ADLPIWQRGL YVAARIGWAV IRDLLSGALS LRAMSLVYTT
LLAMVPALAI AFAIFRAFGF DSYVEAVLTD FLSPLGDEGT QITLQMMEFV NRVNVNILGT
VGFAFLLYTV VSLINKVEAA FNSIWRVEAS RSLARQFTEI VSMSVLGPLL VLTVFGIMAG
ALSNSAIGGL ADNWLISYII EQSSRLVPYA IVIAAFTFIY RMIPNTRVQM DAALVGGLVA
GVTWGAAGWT FATFVVKSAQ YVAIYSAFAS LVFFMIWLYA AWIILLGGCS IAFYYQNRAY
LSPYAGVSLL TLRQCDRMAV QALLLVHDAF ERGQTPWTEE ALARRLHVPM EAMAEISGAL
CEAGLLTFAA GTPSKFVPTR PADKTCVADV LAAVRKKRFS RSVTDDTLAH EPRVEALFEK
MDEQQARLVD PVTIASLMAA DEAAPEVDAG AKSSATLIR
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