Gene Plav_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0930 
Symbol 
ID5455742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp997010 
End bp997507 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID640876501 
Product17 kDa surface antigen 
Protein accessionYP_001412210 
Protein GI154251386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4520] Surface antigen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AAAGCACTCT GATTGTAGGC GCTCTTGCGA TCGCCCTGGC GGGTTGCCAG 
ACCGGCAGTC CCTATGGATA TGGCGGCGGC GCAGGCTTCG GCGGTGGTCC GAAGCAGAAT
GTCGGAACGC TGGCCGGTGC CGTCGCGGGC GGTCTCGCCG GGTCTCAGAT TGGCGGCGGC
TCTGGCCGTC TATGGGCGAC CGGCGCTGGC GTTCTCGTCG GTGCGCTGGT CGGCAACAAT
ATCGGCCGCA GCCTCGACCG CGCCGACCAG GCCTATCTCC AGAACGCGTC GTACGGCGCC
TTCCAGACCG GCCAGACGAC GCAGTGGCGC AATCCGGATA GCGGCAACTA CGGCTATGTT
GAACCCGGAC GCTCTTATCA GACCGCCGGA GCTTATTGCC GCGAATACTC TCAGACCGTT
TATGTCGGCG GCCGTCCTGA AAGCGCCTAT GGCACCGCCT GCCGTCAGCC CGATGGAAGC
TGGCAGATAC GCAACTAA
 
Protein sequence
MKIKSTLIVG ALAIALAGCQ TGSPYGYGGG AGFGGGPKQN VGTLAGAVAG GLAGSQIGGG 
SGRLWATGAG VLVGALVGNN IGRSLDRADQ AYLQNASYGA FQTGQTTQWR NPDSGNYGYV
EPGRSYQTAG AYCREYSQTV YVGGRPESAY GTACRQPDGS WQIRN