| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0882 |
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| Symbol | |
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| ID | 5456778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 950485 |
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| End bp | 952161 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876453 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001412162 |
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| Protein GI | 154251338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.168442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGGCCT TTGAGCTAGG GTCCGCCGCA AATCTTCAGG AGAGCGACTT GAGCACGACC
GAGACCGCCG CCCGCGCGGG GTCGGAGGTG GAGACGGAGG TCCGCAACCG GCGGACCTTC
GCGATCATCT CCCATCCCGA CGCCGGCAAG ACCACGCTGA CCGAAAACCT GCTGCTGAAA
GGCGGCGCGA TCCGCCTTGC CGGCCAGGTG AAGGCACGCG GCGACAAGCG GCGCGCTCGT
TCGGACTGGA TGAAGATCGA ACAGGATCGC GGCATCTCGG TGACGTCCGC CGTGATGACC
TTCGAATACA AGGGCATCAC CTGCAACCTG CTCGACACGC CGGGCCATGA AGACTTCAGC
GAGGACACCT ACCGGACGCT GACGGCGGCC GACAGCGCCA TCATGGTGAT CGACGCCGCG
AAGGGCATCG AGGCGCAGAC GCTGAAGCTG TTCGAGGTCT GCCGCCTGCG CGACGTGCCG
ATCATCACCT TCATCAACAA GATCGACCGC GAAGGCGTGA GCCCGTTCGA TCTGATGGAC
GAGATCGGCT CGAAGCTCGC GCTCGACACC GCGCCGATGA TCTGGCCGGC GGGAATGGGC
GGATTGCTGC GCGGCATCTT CGACCCCGAG AACGACCGCT TCATTCCCTA TGAAAAACCG
GGAACGGAAA AGGGCGGCCC CGACAGCGAA CCGGAAAGCC TGAGCGGCGA GCGCATTGCC
GATTATCTCG GCGCCGACGA ACTCGCCACG TTCCGCGAGG AGATGGAACT CGCGCGGGAG
GGCAGCCCGA CCTTCGATAT CGAGCAGTAC CGCGCGGGCC ACATGACGCC GGTCTATTTC
GGCAGCGCGC TCAGGAAGCT CGGCGTCCGC GAATTGCTGG ACGCCATCGT TCGCTTCGCG
CCGCCGCCGC GCGCGCAGCC CGCCGCGACA CGCATCGTGG AGCCCACGGA GCCGAAGGTT
TCAGGCTTCG TCTTCAAGGT GCAGGCGAAC ATGGACGCAA ACCACCGCGA CCGGGTGGCC
TTCATGCGCA TCTGCTCGGG CAAGTTCAAG CGCGGCATGC GGCTGAAGCT TTCCGGCAGC
GGCAAGACCA TCGGCGTCCA CAATCCGATC CTCTTCTTCG CGCAGGACCG CGAATTGCTG
GACGATGCCT TTGCAGGCGA CATCATCGGC ATTCCGAACC ACGGCACCAT TCGCGTCGGC
GACACGCTGA CCGAGACGGA AGACCTGGTC TTTACCGGCA TCCCGAATTT CGCGCCGGAA
ATCCTCCGCC GCGTGCGGCT CGACGATCCG ATGAAGGCGA AGCATATGCG CCGTGCGCTG
GAGAGCCTTG CCGAAGAGGG CGTCACGCAG GTCTTCAAAC CGGAAATCGG CGCGAACTGG
GTGGTCGGCG TTGTCGGCCA GTTGCAGCTT GAAGTTCTCG CCTCGCGCAT CGCCGCCGAA
TACGACATCA AGGTGCATTT CGAGCCGGCG CCTTACGAGA CGGCGCGGTG GGTCGTGGCG
GAAGACGCCG CCGAACTCAA ACGCTTCATG GAAGCACATC GCGGCAACAT GGCGACCGAC
CGCGACGGCG CGCCTGTCTT CATGGCGAAG AGCAACTGGG AACTGGGCTA TACGCTGGAG
AAGTGGCCCA AGGTGAAGTT CTCGGCCACG CGTGAGCGCG CGCCGGCCCC TGCCTGA
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| Protein sequence | MRAFELGSAA NLQESDLSTT ETAARAGSEV ETEVRNRRTF AIISHPDAGK TTLTENLLLK
GGAIRLAGQV KARGDKRRAR SDWMKIEQDR GISVTSAVMT FEYKGITCNL LDTPGHEDFS
EDTYRTLTAA DSAIMVIDAA KGIEAQTLKL FEVCRLRDVP IITFINKIDR EGVSPFDLMD
EIGSKLALDT APMIWPAGMG GLLRGIFDPE NDRFIPYEKP GTEKGGPDSE PESLSGERIA
DYLGADELAT FREEMELARE GSPTFDIEQY RAGHMTPVYF GSALRKLGVR ELLDAIVRFA
PPPRAQPAAT RIVEPTEPKV SGFVFKVQAN MDANHRDRVA FMRICSGKFK RGMRLKLSGS
GKTIGVHNPI LFFAQDRELL DDAFAGDIIG IPNHGTIRVG DTLTETEDLV FTGIPNFAPE
ILRRVRLDDP MKAKHMRRAL ESLAEEGVTQ VFKPEIGANW VVGVVGQLQL EVLASRIAAE
YDIKVHFEPA PYETARWVVA EDAAELKRFM EAHRGNMATD RDGAPVFMAK SNWELGYTLE
KWPKVKFSAT RERAPAPA
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