Gene Plav_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0811 
Symbol 
ID5456057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp876313 
End bp877158 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID640876380 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001412091 
Protein GI154251267 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.7195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.177861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG AAGACCTGAC ATATGAAGTG AAGGACCGCG TCGCGACCCT GACGCTCAAC 
CGGCCCGACA AACTGAACGC GTGGACGGGA GCGATGGAAA AGAGCGTGAA GAAAGCGATG
GCGGCCGCCG TCGCCGACGA TGATGTGCGC GTCATCGTCA TCACGGGCGC GGGCCGCGGC
TTCTGTGCGG GCGCGGACAT GAACCTGCTG CAGTCGATCA AGGCGGAGAC GTGGGAGGAT
CGCGAGCTGG CGACTGCGGC GCGCGAGGAG AAGTTCGACT TCAGCAGCGG TCTGGGGCCG
GACGTATCGC CTCACTATGG CGGCCGCTTC GGTTATCTGA TGCAGGTGAA GAAGCCGATC
ATCGCCGCGA TCAACGGCCC GGCGGCAGGG CTCGGCCTCG TCTTTGCGCT TTACGCCGAC
ATGCGCTTCG CAGGCTCCGA GGCGAAATTC ACGACCGCCT TCGCCAATCG CGGCTTGATT
GCGGAACATG GCATCTCATG GCTGCTGCCG CATCTCGTCG GCCCGGCCCA TTCGCTCGAC
CTGCTGATGT CCGGCCGCAA GGTGATGGCC GACGAAGCGG CGCGCATGGG CCTCGTCAAC
AAGGTGTTTC CGCAGGAAAC CTTCATGACG AATGTGATGG ACTACGCGAA GGTGCTGTCC
GAGACAGTAT CGCCGCGCTC CATGGCGGTG ATGAAGGCGC AGATATGGAA GGCGCTGTTC
CAGAACTTCA ACGATGCACT GGAAGTGGGC GACAGCGAAA TGCAGAAGAG CTTCGGCAGC
GCCGACTTCA AGGAAGGCGT GGCGCATTTC GTGGAGAAAC GCGTGGCGAA TTTCACGGGA
CGGTGA
 
Protein sequence
MSYEDLTYEV KDRVATLTLN RPDKLNAWTG AMEKSVKKAM AAAVADDDVR VIVITGAGRG 
FCAGADMNLL QSIKAETWED RELATAAREE KFDFSSGLGP DVSPHYGGRF GYLMQVKKPI
IAAINGPAAG LGLVFALYAD MRFAGSEAKF TTAFANRGLI AEHGISWLLP HLVGPAHSLD
LLMSGRKVMA DEAARMGLVN KVFPQETFMT NVMDYAKVLS ETVSPRSMAV MKAQIWKALF
QNFNDALEVG DSEMQKSFGS ADFKEGVAHF VEKRVANFTG R