Gene Plav_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0800 
Symbol 
ID5455844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp865865 
End bp866614 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID640876369 
Producthypothetical protein 
Protein accessionYP_001412080 
Protein GI154251256 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.376791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.485007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCAGC AGAGTTCGCG GCTTGCCGCG TTTGGCTTGA GGACCGGCAT ACTCGCGCTG 
ATCCTTCTGG CGCTTTGTAT TATCGGCAAC CGGTTCGAGC TGGTGCATTT CGGCCTCGCC
GTGCGCGGCC TGGCATTCGC GGCGCTGATC GGCCTCATCG CGGCGCTTCT CTCGGCCGCG
GGCCTTGTCC GCACGCTGGT TTCAAACCGG CGCGGCACGC GGACGGCGAT TGCCGGCCTG
GTGCTCGGCC TGCTCGTCGC CGCGCCTGTC GGACAGGCGA TCATCGCCGG CTCGAAAGTG
CCGCGCATTC ACGACATCAC GACCGATCTC GACAACCCGC CCGCCTTCTC GGCGGCAACG
ATTGCGGCAC GCGGCGAGGC ATCGAACCCG CTTGACCGGG CTGCGCCCGC CGACCTCGCG
GAGCAACAGC GCGCGGCCTA TCCCGATGTC GATACGCTGA CAGTGGACCG GCAGCCGGGC
AAGGTCTACG AGGCCGCGCT CGAAACGGCG CGCGACATGG GCTGGGAAAT CCTGGCCTCG
ACGCCGGAAA CGGGAACCAT CGAGGCGACG GCGACGACGC GGGTGATGAA CTTCCGCGAC
GATATTGCGA TCCGCGTCAC GGAAGCCGGA GAGGGCGCCC ATGTGGATGT GCGCTCGGTC
TCGCGCGTCG GCGAAAGCGA CCTCGGCGCG AATGCGAACC GTATACGGAC TTATCTGCAT
GTGTTGAGGC AGAAGCTGGC GCAAGACTGA
 
Protein sequence
MDQQSSRLAA FGLRTGILAL ILLALCIIGN RFELVHFGLA VRGLAFAALI GLIAALLSAA 
GLVRTLVSNR RGTRTAIAGL VLGLLVAAPV GQAIIAGSKV PRIHDITTDL DNPPAFSAAT
IAARGEASNP LDRAAPADLA EQQRAAYPDV DTLTVDRQPG KVYEAALETA RDMGWEILAS
TPETGTIEAT ATTRVMNFRD DIAIRVTEAG EGAHVDVRSV SRVGESDLGA NANRIRTYLH
VLRQKLAQD