| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0780 |
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| Symbol | |
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| ID | 5453492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 845473 |
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| End bp | 846381 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876349 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001412060 |
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| Protein GI | 154251236 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.175929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.724613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAT CCCCCGCAAA TGCCGCGCAA TTTGAAGCCG GATTGGCCAC GGTCGCCGCG
AAAGTGGAAG AGATGCTCGA CCGCCTTTTG CCGCGCGTGG AAGGACCGGA GGCGCGCATC
GCGGAGGCGA TGCGTTATGC GGCGCTGGGA GGCGGAAAGC GCTTTCGCCC CTTTCTTGTT
GCGCAGAGCG CCGCGCTTTT CGGCGTCGCC TCGGAGGCGG CGTTGCGTGC CGCAGCCGCC
GCCGAATGCG TACATATCTA CTCCCTCGTC CATGACGACC TTCCCTGCAT GGATGATGAT
GACCTGCGCC ACGGTTTGCC GGCCGTTCAC CGCCAGTTCG ACGAGGCGAC GGCAGTCCTC
GCAGGCGACG CTCTCCTGAC GCTAGCCTTC GAAATTCTCG CCGATCCAGA AACGCATGAG
CGTGCCCGTG TCCGCATCGA GCTTGTCCGC CGCCTCGCCA TTGCATCCGG TGCACACGGC
ATGGTCGGCG GCCAGATCAT CGACCTGACC AGCGAGGGCA GGGAGCTCGA CATGGGCGGG
ATCACCCGTT TGCAGCAGCT CAAGACAGGC GCGTTGATCT CGTTCAGCTG CGAGGCAGGC
GCCATTCTCG GCCGCGCCTC GCCCGATGCA CTTCACGCGC TACATGCTTA TGCCCATGAC
ATGGGCCTTG CCTACCAGAT CGCGGACGAC ATTCTGGATG CTGAAGGTGA TGCCGCGGCC
ATGGGCAAGG CGACGGGCAA GGACGCGGCG GCGGGCAAGG CCACCTTCGT TTCGATCCTC
GGCCTCGACC GCGCTCGCGC GCAGGCCGGG ATGCTTGCGG AGCAGGCCGT CCAACACCTT
GATTTGTTTG ATGAAAGAGC CGATCTTTTG CGTCATGCCG CGCATTTCGT TATAACGCGC
CGCAACTGA
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| Protein sequence | MTSSPANAAQ FEAGLATVAA KVEEMLDRLL PRVEGPEARI AEAMRYAALG GGKRFRPFLV
AQSAALFGVA SEAALRAAAA AECVHIYSLV HDDLPCMDDD DLRHGLPAVH RQFDEATAVL
AGDALLTLAF EILADPETHE RARVRIELVR RLAIASGAHG MVGGQIIDLT SEGRELDMGG
ITRLQQLKTG ALISFSCEAG AILGRASPDA LHALHAYAHD MGLAYQIADD ILDAEGDAAA
MGKATGKDAA AGKATFVSIL GLDRARAQAG MLAEQAVQHL DLFDERADLL RHAAHFVITR
RN
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