| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0776 |
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| Symbol | |
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| ID | 5456531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 841631 |
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| End bp | 843019 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876345 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_001412056 |
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| Protein GI | 154251232 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.278749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACCA GTTTCGCGAC GATATCCTCC GCGCTCGCCA TCATCTGGGT GATGCTCATC
GTCTCGAAGT ATCTGCGCTG GCGTCTTGCC GTTCTGGCGC GCCTTTTTAT CCCCGGTTCG
GTCGTTGCGG GCTTCATCCT GATGTTCGCG GGACCGGAAG TGGCGGGCGC CATGTCCGGC
GTCGAACTCG TCCCCGAAGA TGTGCTGGAT GTCTGGCGGC AGCTGCCCGC GCTGTTGATC
AATGTCGTCT TCGCCGGCCT TTTTCTTGGC AAGATCATTC CCGGGCCTCG CCAGATCTGG
CACCGCGCGG GCCCCGTCAT TGCTTATGGC CAGGCCATCG CTTGGGGCCA GTATGTCGTT
GGAATCGGCC TTGTCATCGC CGTTCTCGCG CCGTTCTATG CCACGCCGCC GGTCGCTGGC
GCCCTGATCG AGATTTCGTT TGAAGGCGGT CACGGCACGG CCGCTGGCCT CGGCCCGACC
TTCGATGCGG TGGGCTTTTC CGCGGGCACA GATCTCGCTC TTGGCCTCGC AACCATCGGC
CTTGTCGGCT CCGTGCTGAT CGGCCTTGTA CTGATCAACT GGGCGGCCCG GCGCGGTCTT
GTCGATCCAG AAGGCATCCG CTCGCCGACG CCAGAACTTC ATCCGGATCC ACCCGCCGAT
ACGACGGAGC AGCTTGCAGC CCGCCCCGCG ACGACGGATG CCGCGCAGCC CATCGATCCG
ATGTCGCTGC ATCTCGGTCT CTTCGCCGTC GCTATTGCTA TCGGTTGGGG CCTGCATCAA
CTGTTGATCC TTCTTGAGGA ACACACCTGG GGCCGCGACG GCACGCGGAT CCTTGCCTAT
CTGCCGCTTT TCCCGCTCGC CATGCTCGGC GGTGTCGCCG TGCAGGTCGT GGTCAGCCGC
TATATTGGCA TGGGCCTTGT GGACCGGGGA TTAGTGAACC GGATTTCCGG TGCCGCCCTC
GACATTCTGA TTGTCGCGGC GCTGGCGACG CTCTCATTGA CCGCGATCAA CGATAATCTC
GGCCCCTTCG TCTGGCTCGC CGTCGGCGGC ATCGCCTGGA ATATTTTTGC GTTGCTGGTG
CTGGCACCCC GCATGCTTGG GCCCGACTGG TTCGCGCAAG GCATCCCGCA TTTCGGACAG
GCGATGGGGA TGACGGTGAG CGGCCTGATG CTCTTCCGTA TCGCCGATCC TGAAAACCGC
TCCGGAGGGC TGGAGAATTT CGGCTACAAG CAGCTTTTCT TCGCCCCCAT TGTCGGCGGC
GGCCTGTTCA CGGCGGCCGT CATGCCGCTT ATCCTCGCCT TCGGCCCCTG GCCCCTGCTG
ATTTGCACGA GCCTGCTTCT GGCAGTCTGG ATTTATGTCG GCGAGCGATT GGCGCGGAAG
GTTCCGTAG
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| Protein sequence | MVTSFATISS ALAIIWVMLI VSKYLRWRLA VLARLFIPGS VVAGFILMFA GPEVAGAMSG
VELVPEDVLD VWRQLPALLI NVVFAGLFLG KIIPGPRQIW HRAGPVIAYG QAIAWGQYVV
GIGLVIAVLA PFYATPPVAG ALIEISFEGG HGTAAGLGPT FDAVGFSAGT DLALGLATIG
LVGSVLIGLV LINWAARRGL VDPEGIRSPT PELHPDPPAD TTEQLAARPA TTDAAQPIDP
MSLHLGLFAV AIAIGWGLHQ LLILLEEHTW GRDGTRILAY LPLFPLAMLG GVAVQVVVSR
YIGMGLVDRG LVNRISGAAL DILIVAALAT LSLTAINDNL GPFVWLAVGG IAWNIFALLV
LAPRMLGPDW FAQGIPHFGQ AMGMTVSGLM LFRIADPENR SGGLENFGYK QLFFAPIVGG
GLFTAAVMPL ILAFGPWPLL ICTSLLLAVW IYVGERLARK VP
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