| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0701 |
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| Symbol | |
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| ID | 5454570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 762662 |
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| End bp | 764509 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876270 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001411981 |
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| Protein GI | 154251157 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0292905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGG CGGGCAGCGC CCTCAACCAA ACCTTTCAGT TGCCTTGGAC CGAGAATCGG
GACTCGCGCG GCTCAGCGCC GCCGCTGCGC GCCGATGACC CGCTCGCCAA GCTTTTCCAG
CGACTTTCTG AGCGCCGGTT CTTCAATTTT TTCAAGGCCT TGGTCAAGCG CCGCGCGCTC
CTCCGGCGCC AGCGGCCTGA TCTTGCGATA GCGCGGCCGC GCCTTGACCG GCAGCGGGCC
TTGCACGAGT TTCAGCCGCG CGACGGCGCT GTATCCATAA TAGGAATTGA TGCGCTCGAC
GATCTGCGGT TCGAGGTGAC GGATTTCGAC CGCGACCGGA CCGTCGACAC GGATGGTGAG
AACCGCGCCG CTGCGCCGGC CCTTGCCCGC GTCGTCACCG GAAGTCCTTG GAAACACAAG
CTTTTCCGGC GCCGAAAATT CCGCGAGGCC GCCGCCGACG ATCTCCGGCC AATGCGCCAG
CACATGCGCT TCCTGGAAGC CGCGCTTCAC GAAGGCGGCG CGCGCCACCT GCATCACCCG
CGCGCCGACG GGCGGCAGGC TGAAGCGGCG CGACGCAATC CTGTTGCCGG TGATGCCGTT
CATCTCGTTT CCTCTGAACC GGCGCGCATT CTGACTCGAA ATCGTCATCC ATGCGAATTG
ACGGATGAGG GCATTCCAAG CGAAGACTGG TGCATGAGCA TGAAGGCGAA AAAAGCCAAG
GAAATCAGCG GGAAAGCGGC CGCCGCGCCG CTGCTCGCCT GGTATGACAA ACATGCCCGC
GTGCTGCCCT GGCGTGCGCG AAAAGGCGAA CGGGCGGACC CTTATGCGGT CTGGCTTTCC
GAAATCATGC TGCAACAGAC GACGGTGGCG ACGGTCGGGC CTTATTTTAC GGGCTTTTTG
AAGCGCTGGC CGAATGTGGA GGCACTGGCC GCCGCGCCGC AGGAAGAGGT GATGAAGGCA
TGGGCGGGGC TCGGTTATTA CAGCCGGGCG CGCAATCTTC ATGCCTGTGC GAAGGAAGTA
TCGTCCGAGT ACGGAGGGAA ATTTCCCGAT ACGGTGGAAG GACTTGAGAG CCTGCCGGGC
ATCGGCCCCT ATACGGCGGC GGCAATCGCG GCGATCGCCT TTGGAAGAGC TGCGACGGTG
GTGGATGGAA ATGTCGAGCG CGTGGTGGCG CGGCTTTTCG AGATCGAAAC GCCGCTGCCG
GCGGCGAAGC CGGATATCCG GGAGAAGGCC CGCACCCTGA CGCCGGAGCA GCGGGCAGGC
GACTTCGCGC AGGCCATGAT GGACCTCGGC GCGACCATCT GCACGCCGCG CTCTCCCGCC
TGTAATCGCT GTCCGATCAA TGACTTATGC GATGCACGGG CGGCGGGCAC GCAAAATCTC
CTGCCTGCCC GGGCGCCGAA AAAGGCCCGC CCGACGCGCC GCGGCGCCTG CTTCTGGCTG
GTGCGGGAGG GGCATGTCTG GCTCCGCCGG CGGCCCGACA AGGGGCTCCT CGGCGGCATG
CTGGAAGTGC CCGGAACGCC CTGGGATGAG AGCGACCGTC ATCGAACTGT CATCGAACTG
TCACACGACG AAAATGGAGG CCGCCGGGGT GTCGCCGGAG AGGTGCTCGA CCACGCGCCG
ATGGAAGCGG AATGGCGACT TGTCCCCGGT TTGGTTGAAC ACACGTTCAC GCATTTTCAT
CTCGAGCTGG AAGTCTTCAC CGCGACGACG CGAAAAAAAA TTGTCCCCGG GCGCGAAGGC
ATGTGGGTGC CGCTTGAGGA GGTCGCCGGC GAGGCGCTGC CGACCGTGAT GCGGAAGGTC
GCGGCACATG CGATGCCGGA TGCGGGACCG CTTTTTGTGA AGCGGTGA
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| Protein sequence | MAAAGSALNQ TFQLPWTENR DSRGSAPPLR ADDPLAKLFQ RLSERRFFNF FKALVKRRAL
LRRQRPDLAI ARPRLDRQRA LHEFQPRDGA VSIIGIDALD DLRFEVTDFD RDRTVDTDGE
NRAAAPALAR VVTGSPWKHK LFRRRKFREA AADDLRPMRQ HMRFLEAALH EGGARHLHHP
RADGRQAEAA RRNPVAGDAV HLVSSEPARI LTRNRHPCEL TDEGIPSEDW CMSMKAKKAK
EISGKAAAAP LLAWYDKHAR VLPWRARKGE RADPYAVWLS EIMLQQTTVA TVGPYFTGFL
KRWPNVEALA AAPQEEVMKA WAGLGYYSRA RNLHACAKEV SSEYGGKFPD TVEGLESLPG
IGPYTAAAIA AIAFGRAATV VDGNVERVVA RLFEIETPLP AAKPDIREKA RTLTPEQRAG
DFAQAMMDLG ATICTPRSPA CNRCPINDLC DARAAGTQNL LPARAPKKAR PTRRGACFWL
VREGHVWLRR RPDKGLLGGM LEVPGTPWDE SDRHRTVIEL SHDENGGRRG VAGEVLDHAP
MEAEWRLVPG LVEHTFTHFH LELEVFTATT RKKIVPGREG MWVPLEEVAG EALPTVMRKV
AAHAMPDAGP LFVKR
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