| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0688 |
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| Symbol | |
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| ID | 5454814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 749450 |
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| End bp | 750592 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876257 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_001411968 |
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| Protein GI | 154251144 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.628122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAC CTGCCGTTCA AACGGAAATC CTGAAGACGA CGCCGCTACA CGCGTTACAC
GTCGAACTCG GCGCGAAGAT GGTGCCTTTC GCGGGCTATG ACATGCCGGT GCAATATCCG
GACGGTGTGC TGGCGGAGCA TCTGCACACG CGCAAGGCGG CGGGACTGTT CGATGTTTCG
CATATGGGAC AGGCATACCT TGTGGGCCCC GACCATGCGA GCATATCGGC CGCCATCGAG
GCGCTCGTGC CGGGCGACAT ACTCGGCCTG GAGCCGCTCG CCATTCGCTA TACGCTGCTG
CTGAACGACA AGGGCGGCAT ACGCGACGAC CTCATGGTGA CCAGGACGGC GAAGGACGGC
ATGCTTTTCC TCGTCGTCAA CGCCGCCTGC AAGGATGCGG ACTTCGCGCA TATCGCCGCC
AACCTGCCCA AGGGCATCGA GCTGCGCCGT CTTGAGGACC GCGCGCTGAT CGCGCTGCAG
GGACCCGAAG CCGCCGCCGT ATTCGCGCGG CTCGCGCCCG GGGCGGCGAC GCAGGACTTC
ATGACCGGGG TCGAAATGAC AGTGGCGGGC ATTCCCTGCC TCGTCAGCCG CTCCGGCTAT
ACCGGCGAGG ATGGCTACGA GATTTCAGTG CCGGACGGCG AGGCGGTTGC GCTGACGAAA
AAACTTCTCG CCGAACCGGA GGTCAAGCCG ATAGGCCTTG GCGCACGCGA TTCATTGCGC
CTTGAAGCGG GACTATGCCT TTATGGGCAC GATATCGATG AGACGACGAC GCCCGTCGAG
GGCGCGCTAA CCTGGACGAT TTCGAAGCGC CGCCGCGAAG AGGGGAACTT CCCCGGTGCG
AAAATCATTC TCGATCAGGT TGCGAACGGC GTGACGAGGA AGCGCGTGGG ACTGTTGCCG
GAAGGCAAGG CGCCCGCCCG CGAGGGGACG GAAATCACCG ATAAGTCGGG CCGCAAGATC
GGTGTGGTCA CGAGCGGCGG TTATGGGCCG AGTGTCGGCG GACCGATCGC AATGGGATAT
GTCGAGACTT CGCACGCAAA ATCCGGCACG GATATCGAGC TTATGGTGCG GGGCAAGGGA
CGGCCGGCAA AGGTCGTGCC CATGCCCTTT GTCGAAAAAC GTTTTTACCG GCCGGCTAAA
TAG
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| Protein sequence | MSEPAVQTEI LKTTPLHALH VELGAKMVPF AGYDMPVQYP DGVLAEHLHT RKAAGLFDVS
HMGQAYLVGP DHASISAAIE ALVPGDILGL EPLAIRYTLL LNDKGGIRDD LMVTRTAKDG
MLFLVVNAAC KDADFAHIAA NLPKGIELRR LEDRALIALQ GPEAAAVFAR LAPGAATQDF
MTGVEMTVAG IPCLVSRSGY TGEDGYEISV PDGEAVALTK KLLAEPEVKP IGLGARDSLR
LEAGLCLYGH DIDETTTPVE GALTWTISKR RREEGNFPGA KIILDQVANG VTRKRVGLLP
EGKAPAREGT EITDKSGRKI GVVTSGGYGP SVGGPIAMGY VETSHAKSGT DIELMVRGKG
RPAKVVPMPF VEKRFYRPAK
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