| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0665 |
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| Symbol | |
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| ID | 5456119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 726385 |
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| End bp | 727197 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876234 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001411945 |
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| Protein GI | 154251121 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.123814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAG TTCGATCGCA GACCGCGCCC GAGGACCGCG CGCTTTATCT CTGGCCGGAC
GCCGCCCTTT ATATCGGCCG CGACGTTGCG CCCGATACGC ATCGCCACAG CGCGGCCCAA
TGCGCCGTCG CGCTTGACGG CACCCTGCTC GTGCGGACGG AAGACGGCTG CGAAATCGAA
ACCAGGGAAG CCGTGTTCGT CGATGCGAAT GTAACCCATT CGATCGCAAG CCCCGGCGGG
AATGTCGCCT TCCTTTATCT CGAGCGAACC TTCTTTTCCC AATGGCCCGT CCCGGCGGGC
AGCGGACAAT CCGTACAAGG CATATATTTC CTGCGCGCCA CGCTCGATGC GGCGCTCCGC
GCACGGCTCG CGGCGAGCTG GTCGGCGCCG CTCGGCGAGG CGGAGGCTTC CGAAACGAGG
GAAGGCATCC TCGCGCTCCT CCTGCCCGCC GGCGCGCGGC GGCCGCCGGT CGATCCCCGC
ATCCGAAAGA TACTCGGCCA CATCGCCACG CATACGAGCG ACCATCCGAG CGGAGAGCGG
CTTGCGGCGC TGGCCGGCCT CTCGCCGGGC CGCTTCCAGC ATCTCTTCAC CGAGCATGCG
GGCATGCCCG TCCGCCGCTA TCTTCTGTGG TGCCGCATTC GCCGCGGCAT CGAGGCGCTG
CATGACGGCG CCAACCTAAC GCGCGCGGCG CATGAAGCGG GCTTCTCCGA CTCCGCCCAT
TTCAGCCGGA CCTTCAGGGC GATGACCGGC ATCCCGCCCT CGGAAGTTTT CGGCCGGAAA
TCCGGCACCA GCATCATTTT TTGCGGCGGC TAG
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| Protein sequence | MPQVRSQTAP EDRALYLWPD AALYIGRDVA PDTHRHSAAQ CAVALDGTLL VRTEDGCEIE
TREAVFVDAN VTHSIASPGG NVAFLYLERT FFSQWPVPAG SGQSVQGIYF LRATLDAALR
ARLAASWSAP LGEAEASETR EGILALLLPA GARRPPVDPR IRKILGHIAT HTSDHPSGER
LAALAGLSPG RFQHLFTEHA GMPVRRYLLW CRIRRGIEAL HDGANLTRAA HEAGFSDSAH
FSRTFRAMTG IPPSEVFGRK SGTSIIFCGG
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