| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0642 |
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| Symbol | |
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| ID | 5454017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 705479 |
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| End bp | 706351 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876211 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001411922 |
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| Protein GI | 154251098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.603943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAATA CCAACCTCCT TCTTCCCGGT CTCTCCGTCC TCGCCGACCA ATATGATGCG
CTTCTCTGCG ACGTCTGGGG CGTGCTCCAC AATGGCCGCG AGGCCTATCC GGGCGTCGCC
GAGGCACTGG GAAAATTCCA GGCGAAGGGC GGTCATGTGC TGCTGCTGTC CAATGCGCCG
CGCCCGTCCG ATGCGCTGCC CATCATGTTC GTGCGCATGG GCATTCCGCA TGATGTCTAT
GACGGCATCC TGACGTCGGG CGATGCAACA AAAATCTATC TCGCTTCGCA TGAACGCGGC
ACGCGCTGCT ACTATATCGG TCCCGACCGC GACCTGTCGC TCTTCGACGG CACGGGCGTC
TCCAGCGTCG GCGAAGCGGA GGGTGAATTC ATTCTCGTCA CCGGGCCCTT CGACGACGAG
ACCGAAGGGC CGGAAGACTA CCGCGCGCAA TTCACTTCAC TCGCCGCGCG CAAGCTGCCG
CTCATCTGCG CCAATCCGGA CATCATCGTC GAGCGGGGCG ACCGACACAT CTATTGCGCC
GGCGCTCTCG CGCGGCTCTA TGAAGAGCTC GGCGGCGAAG TCGTCTATTT CGGCAAGCCG
CACGGCCCCG TCTACGAGAT CGCCCGCAAA CGCCTCGCCG ATCTTGCGGG CGGCGCCATT
CCCGATGCCC GCGTCCTCGC GGTCGGCGAC GGCCCCCTCA CCGACATCAA GGGCGCGAAC
GATGCCGGCA TCGACGCCCT TTTCATTACC GGCGGCATCG CGGCGGCCGA TTGCGGCCCT
TCCGTCGAGG CGCCGGAGGA GGCGCGTGTC GATCTGGTGC TGTCCCGGGC CGGGGTCAGG
GCCGTCGGCG CCATGCCCCG GCTGATCTGG TAA
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| Protein sequence | MHNTNLLLPG LSVLADQYDA LLCDVWGVLH NGREAYPGVA EALGKFQAKG GHVLLLSNAP
RPSDALPIMF VRMGIPHDVY DGILTSGDAT KIYLASHERG TRCYYIGPDR DLSLFDGTGV
SSVGEAEGEF ILVTGPFDDE TEGPEDYRAQ FTSLAARKLP LICANPDIIV ERGDRHIYCA
GALARLYEEL GGEVVYFGKP HGPVYEIARK RLADLAGGAI PDARVLAVGD GPLTDIKGAN
DAGIDALFIT GGIAAADCGP SVEAPEEARV DLVLSRAGVR AVGAMPRLIW
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