| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0614 |
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| Symbol | |
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| ID | 5456537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 679035 |
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| End bp | 680180 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876183 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001411894 |
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| Protein GI | 154251070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3616] Predicted amino acid aldolase or racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.605452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.988857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCG AAGCATTGCA GGCGGCGAAG GCCATGATCG GAAAGAAGGG CTCGCGCGCC
GCGATCCCGA CACCGGCGCT TGTGCTCGAT CTCGACGCCT TCGAGCGCAA CGTCGCGCGG
ATGGCGGAGC ACTGCAAGGT AAGCAACCTT TCGATCCGCC CCCATGCGAA GACGCATAAA
TGCGTGACCA TCGCCAAGGC CCAGATCGCG GCCGGCGCCG TCGGCCAGTG CTGCGCCAAG
CTCGGCGAGG CGGAGGCGAT GGCGGCGGGC GGCATCGAGA GCATTCTCAT AACCTCGCCC
GTCGTGACGG TGCAGGGCAT CGAGCGGCTG ATGGCGCTGA ACGAGAAAAT GCCGGACCTG
ATGGTCGTGG TCGACAATCC GGTGAACGCG CGCGCATTGG CGGCAGCGGC GGCGGAAAAG
AAACGTGTGC TGAAGGTTCT GGTGGACCTC GATGTTGGCC TCCACCGCAC AGGCATCCGC
CCCGGCGAGG ACGCGCTGGC GCTGGCGGAA CTTCTCGACG CGGCGGAATT TCTCGAACTG
CGCGGGCTGC AGGCCTATGC CGGACACCTG ATGCATATTC ACGACTTCGC CGAGCGTCGC
GAGAAATCGC TTGCGGCGAT GAAGGTGCTG GGCGATCAGC GCGACGCGCT GAAGGCCAAG
GGCTTGCCCT GCGATATCGT GTCGGGGGGC GGCACCGGCA GCTACAATAT CGACCCGGAA
GCGAAGGTGC TGACCGAGCT GCAGGGCGGC TCCTATGTTT TCATGGACAA GCAGTATCAC
GACGTCGCGC TCGGCAATGG CGCGAGCTTT CCCTTCGAGA CGTCGCTCTT CGTGCAGATG
TCGGTCGTCT CCGCCAACAC GAAAAATCTC GCGACGACGG ATGCCGGTTT CAAATCCTTT
TCGACCGATG CCGAGTCGCC GAAACTTCTT TCCGGCGCGC CGGAAGGAGC GGGCTATTTC
TTCTTCGGCG ACGAGCAAGG CGGCGTTCTT CTACCGGATG GCGCGTCGCT GCCGATCGGC
AGTGTACTGA CGGCCATGAC GCCGCATTGC GACCCGACGG TGAATTTATA CGACGCCTAC
CACGTCGTCC GGGGCGACAC GCTGGTCGAT ATCTGGCCCA TCGAGGCGCG CGGCAAGAGT
GCCTGA
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| Protein sequence | MTSEALQAAK AMIGKKGSRA AIPTPALVLD LDAFERNVAR MAEHCKVSNL SIRPHAKTHK
CVTIAKAQIA AGAVGQCCAK LGEAEAMAAG GIESILITSP VVTVQGIERL MALNEKMPDL
MVVVDNPVNA RALAAAAAEK KRVLKVLVDL DVGLHRTGIR PGEDALALAE LLDAAEFLEL
RGLQAYAGHL MHIHDFAERR EKSLAAMKVL GDQRDALKAK GLPCDIVSGG GTGSYNIDPE
AKVLTELQGG SYVFMDKQYH DVALGNGASF PFETSLFVQM SVVSANTKNL ATTDAGFKSF
STDAESPKLL SGAPEGAGYF FFGDEQGGVL LPDGASLPIG SVLTAMTPHC DPTVNLYDAY
HVVRGDTLVD IWPIEARGKS A
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