| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0597 |
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| Symbol | |
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| ID | 5453954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 659214 |
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| End bp | 660743 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876166 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001411877 |
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| Protein GI | 154251053 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.490677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.372595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA GCTCCGGTTT CGCAGGCGGC TTGCATGTAT TGCCCCCGCT CGCGGCACAT
CTCGTCAGCG CGTCCACCGC GCTGCGTGAA GAGCTCGGCA AAGTTGCCGC CTCGGCGGCC
GCGGGTCCGA TCGATTTCAG TTTCTCCGTT CCCGATGACG GCATCGAGCC GCTGCTCGAG
CCCGGCATCG ACGCGCTCAT TATCGACATC GGCGATGGCG GTCCCGTTGC GCTCGGCTTT
CTCCGCCGTG TCATCGCGCT TGGCCCCAAT GCGCCGGTCA TCGCCATCGG TGCCGACGAT
GCGGCGCTCC AGGCCGAGGT GATCGGCGCA GGGGCGGAAG ACTGCCTTTC CACCGATACG
GACGAACCGC GCGCGGTCGG CCTCGCGATC CGCCGCGCCG TCGCCCGGCG CATCATGCGC
GAAGACGGTG CAAGCGAGCC TGTGCCCACC CCGCAAGCCG GCCCTCACGT CACGCTCGTC
CAGGAAACGC CGGAAGCCAT CGTCATTCTC GACAGCCAGG GCACCGTGCG CTTCGCAAAC
GGTGCGGCGC AGGAACTTCT CGGCCGCGGC AGCGAACTGG TCGGCCAGCC TTTTGGTCTG
CCGAGCGAGC CCGGCGAGCA CGACATCACG ATCCGGCGGC CCGACGGCGA TAACCGTTTC
GCCGAAATGC GCATCGTCGA CACACGCTGG GGCGGCGTTC CCGCGCGCGT CGCGGCGCTC
AACGACGTGA CCGTCCGGCG CAAGCTCGAA GAGACGATGC AGGCCGTGGA AGCGCGCAGC
CAGGAAACCC GCAAGCGCAG CCAGAGCTTC TTCTCCAACG TCAATCACGA CCTGCGCACG
CCGCTCACGC ATATCATCGG CTTCTCGGAA ATGATGAAGA ATGAGCGCCT CGGGCCCATG
GGCACCGACC GCTACAAGGA ATATGCGAGC GACATCTATT CGAGCGGCAC CATGCTGCTC
GACATGATCG AGGATCTGCT CGGCATCGCC GAAGCGGAAA TGGACCAGAT CGATCTCACG
GATGAAATCT GCAATCTCGG CCAGCTCGCC GAGATCGCCG TCGCCAGCCA GCGTCAGAAC
GCGGCTATCG AGGGCGTCAC CATCGAGGTT TCCTGTCCCG AGCGCCTGCC CGGTTTCCGG
GGCGATGCGC GTCGTCTCCG TCAGGGCCTC TTCCGTCTTC TCGCGGAAGC CGTGCATACG
GCGCATCGCG GTTCCACCAT CCGCCTCAGC GTGGCGGAAG AAGATGGCGG CATTGCCGTG
ACGCTCGACG AAATCAGGAC GCATACCGAC GCTCTGATGG AGCAGGATGC ATTCCCCTAT
ATCGTTGGCA CGGACGATCC CTTCGTCAGC GCGGAAGACA GCAGCGCGCC GCGCGAGGAA
AGCCTCGCCC TCTCTCTCAC CCGCAAGGTG ATGGAATTGC ATGGCGGCCG GCTCAATATC
ATGCGCGCGG AACGCGGCCA GCCCGGGCAC CGGCCGGAAA TCGGCATGAA AATCAGCGTC
CATTTTCCGT CGGAACGCGT CATCCGCTGA
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| Protein sequence | MSNSSGFAGG LHVLPPLAAH LVSASTALRE ELGKVAASAA AGPIDFSFSV PDDGIEPLLE
PGIDALIIDI GDGGPVALGF LRRVIALGPN APVIAIGADD AALQAEVIGA GAEDCLSTDT
DEPRAVGLAI RRAVARRIMR EDGASEPVPT PQAGPHVTLV QETPEAIVIL DSQGTVRFAN
GAAQELLGRG SELVGQPFGL PSEPGEHDIT IRRPDGDNRF AEMRIVDTRW GGVPARVAAL
NDVTVRRKLE ETMQAVEARS QETRKRSQSF FSNVNHDLRT PLTHIIGFSE MMKNERLGPM
GTDRYKEYAS DIYSSGTMLL DMIEDLLGIA EAEMDQIDLT DEICNLGQLA EIAVASQRQN
AAIEGVTIEV SCPERLPGFR GDARRLRQGL FRLLAEAVHT AHRGSTIRLS VAEEDGGIAV
TLDEIRTHTD ALMEQDAFPY IVGTDDPFVS AEDSSAPREE SLALSLTRKV MELHGGRLNI
MRAERGQPGH RPEIGMKISV HFPSERVIR
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