| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0594 |
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| Symbol | |
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| ID | 5456318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 655081 |
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| End bp | 656526 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876163 |
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| Product | hypothetical protein |
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| Protein accession | YP_001411874 |
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| Protein GI | 154251050 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.150494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.432719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGG ACAAAAAAGT CTTTGCGGGC CCGCGCATTA GGCGGCTCCG GCGCGAGCGC
GGACTGACCC AGGCGCGGAT GGCGGCCGAT CTCGGCATTT CGGCGAGTTA TCTCAATCTG
ATCGAGCGCG ACCAGCGGCC TGTCTCGGTG CAGGTGCTGC TGAAGCTCGC CGATGTCTAT
GACGTGGAGC TGCGGACGCT GGGTGGCGAC GAGGAGGCGC AGGCGCTGAC GACGCTGCGC
GAGGTGTTTT CCGATCCGCT GTTCCGGGAT GCGGGGCTGA CGACACAGGA TTTGCGCGAG
ATCGCCGCGG CGAGCCCGGC GGCGGCGGAT GCGATCAGCA ATCTCTACCG GGCCTATCAG
GAGAGCACGG TGAGCGGTTC CATGCTGGCG GAGCGCCTTG CCGACCGCGA TTTGAGCGAG
GGGACGGAAG CACCGGGCCT GCCGCTTGAA GAGGTGCGCG ACTTCATCAA CAGCCGCAAC
AACCACTTTC CCGAACTGGA CGACGCGGCG GAGCGGCTCT ATGCGAAGGC GGGCATCGGC
TCGGACGAGC CCTATGTGGC GCTCCGGACG GCGCTGCGCG ACCTTCACGG CGTCTCGACC
CGCATCGCGC CCGCCGATTT GATGCCGCAT GAACTGCGTC GCTACGACCG CCACCGCCAG
ACGATCTTCC TGTCGGAACT GCTGGACCAG CCGGGACGCT CGTTCCAGCT TGCCTATCAG
CTCGGCTATT TCGAGCAATC GCGCACCATG GAAGACATCG TGGAAGCCTC GGGCCTCGAA
AGCGACGAGG CGCAGCGGCT CTGCCGCGTG GCGCTGGCGA ATTATTTCGC CGCCGCGCTG
CTGATGCCTT ATTCGGCATT CCAGAAGACG GCGGAGGCGA CGCGCTACGA CATCCGCCTG
CTCGGTCGGC GCTTCGGCAC GAGCTTCGAG CAGGTCTGCC ACCGCCTGAC GACGCTGCAG
CGGCCGGGCG CGCGCGGCAT CCCCTTCTTT CTCATCCGCG TCGACAATGC AGGCAATGTC
TCGAAGCGCT TTTCGGCGGC GGGCTTTCAC TTCGCGCGTT TCGGCGGCAC CTGCCCGCGC
TGGAACGTGC ATGACGCTTT CCGCGTGCCG GGCGAGGTCT ATACGCAGGT CGTGCAGATG
GAAGACGGCA CGCGCTATTT CTCAATCGCG CGGACGGTGA GCCGCGCGGG CTCGGGGATA
GGCGTACCCG GCGACCAGTA TGTGGTGGGG CTCGGCTGCG AAATCGCCCA TGCACGCAAG
ATCGTCTACA GCCAGGGCTA CGATCTCGAC GACGAGCGAG GCGCCATGCC CATCGGCGTC
AATTGCAGGC TTTGCGAAAG GCTCGACTGT TCGCAGCGCG CCTTCCCGCC GCTGAAACAC
CGGCTGACGG TTGAAGACCA TGTGCGCGGC GTCTCGCCCT TCGGCGTGCC GGTGAAGGCG
GTCTAG
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| Protein sequence | MASDKKVFAG PRIRRLRRER GLTQARMAAD LGISASYLNL IERDQRPVSV QVLLKLADVY
DVELRTLGGD EEAQALTTLR EVFSDPLFRD AGLTTQDLRE IAAASPAAAD AISNLYRAYQ
ESTVSGSMLA ERLADRDLSE GTEAPGLPLE EVRDFINSRN NHFPELDDAA ERLYAKAGIG
SDEPYVALRT ALRDLHGVST RIAPADLMPH ELRRYDRHRQ TIFLSELLDQ PGRSFQLAYQ
LGYFEQSRTM EDIVEASGLE SDEAQRLCRV ALANYFAAAL LMPYSAFQKT AEATRYDIRL
LGRRFGTSFE QVCHRLTTLQ RPGARGIPFF LIRVDNAGNV SKRFSAAGFH FARFGGTCPR
WNVHDAFRVP GEVYTQVVQM EDGTRYFSIA RTVSRAGSGI GVPGDQYVVG LGCEIAHARK
IVYSQGYDLD DERGAMPIGV NCRLCERLDC SQRAFPPLKH RLTVEDHVRG VSPFGVPVKA
V
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