| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0593 |
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| Symbol | |
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| ID | 5454106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 653264 |
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| End bp | 654889 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876162 |
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| Product | malate synthase |
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| Protein accession | YP_001411873 |
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| Protein GI | 154251049 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.251212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CAGCAGCCAC GACGATCGCG GACGGCGTTG CCGTCAAGGG CGCCCTCAAG
CCGGGCTATG AGCGGGTGCT GACGCCGGAG GCGCTGGCCT TCGTCGCGGA GCTTGAGCGC
AATTTCGGGG AGCGCCGCCG CGAGTTGCTG GCCGCCCGCG CCGAACGCCA GAAGAAGTTC
GATGCCGGCG AGCTGCCCGA CTTCCTGCCC GAGACGAAGT CGATCCGCGA GGGCGACTGG
AAGGTCGCGC CGATCCCGAA GGATTTGCTC GACCGCCGCG TCGAGATCAC CGGCCCGGTC
GACAACCGCA AGATGGTCAT CAACGCGCTC AATTCCGGCG CGCAGTCCTA CATGACCGAC
TTCGAGGACG CCGCCGCGCC GACCTGGGAC AACATGATCG GCGGCCAACT GAACATGATG
GCCTATTGGG ACAAGGAAAT CGGCTTCACC GACGAGACGA ACGGCAAGCG TTACGACGTG
GTCGCGAAGC CCGCGACGCT GATCGTCCGC CCGCGCGGCT GGCATCTGGA AGAAGCCCAT
GTCGAGATCG ACGGCCAGGC GATGTCCGGC AGCCTGTTCG ATTTCGGCCT CTACTTCTTC
CACAACGCCA AGCGCCAGAT CGCATCCGGC TCCGGCCCTT ATTTCTATCT GCCGAAGATG
GAGAGCCACA AGGAAGCCCG CCTCTGGAAC GACGTCTTCG TCCATGCGCA GAAGAAGCTC
GGCATCCCGA ACGGCACGAT CAAGGTCACC GTCCTGATCG AGACGCTGCC CGCCGCCTTC
GAGATGCACG AAATCCTTTA TGAGCTGAAG GACCACATTG TCGGCCTCAA TTGCGGCCGC
TGGGACTACA TCTTCAGCTA TATCAAGCGG CTCGGCAAAA ACCCGAACTT CATCCTGCCG
GACCGCGCGC AGGTCGTGAT GGGCGATGCC TTCCTCAATG CCTATTCGCT GCTGCTGGTG
AAGACCTGCC ATGAGCGCGG CGCCTTCGCG ATGGGCGGCA TGGCCGCGCA GATCCCCGTG
AAGGGCGACG AGGCGGCGAA CGAAGCCGCC TTCAACAAGG TCCGCGCCGA CAAGGAACGC
GAAGCCAATA ACGGCCATGA CGGCACCTGG GTCGCCCATC CCGATCTCGT GAAGGTCGCG
ATGGAAATCT TCGGCAAGCT CGAAGGCCCG AACCAGCTCG CCCGCCAGCG CCAGGACGTG
AATGTCGGCC AGAAGGAATT GCTGCAGCCC CACAAGGGCG AGCGCACCGA GCATGGCATG
CGCGAATGCT GCCGCGTCGG TGTGCAGTAT ATCGAGGCGT GGATCGGCGG CCGTGGTGCC
GTGCCGCTCT ACAACCTCAT GGAAGACGCC GCCACCGCCG AGATCAGCCG CACGCAGATC
TGGCAGTGGA TCTATCACGG CGCCACGCTT TCCGACGGCC GCAAGGTCAC GCCGGAACTC
TTCCGCGACG TGCTGGAAGA CGAAATGAAA AGCTTGCGCG AAACGCTTGG CGAGACGCGC
TGGAATGAAG GTCACTTCGA GCAGGCAATC GGCCTCTTCT CAGAGATGAC CACGGCCAGG
GAATGCGAGG AGTTCCTGAC GCTGCCTGCC TACCGCCTCA TTCTCGAAAA CGAAACCCGC
CCCTGA
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| Protein sequence | MSKAAATTIA DGVAVKGALK PGYERVLTPE ALAFVAELER NFGERRRELL AARAERQKKF
DAGELPDFLP ETKSIREGDW KVAPIPKDLL DRRVEITGPV DNRKMVINAL NSGAQSYMTD
FEDAAAPTWD NMIGGQLNMM AYWDKEIGFT DETNGKRYDV VAKPATLIVR PRGWHLEEAH
VEIDGQAMSG SLFDFGLYFF HNAKRQIASG SGPYFYLPKM ESHKEARLWN DVFVHAQKKL
GIPNGTIKVT VLIETLPAAF EMHEILYELK DHIVGLNCGR WDYIFSYIKR LGKNPNFILP
DRAQVVMGDA FLNAYSLLLV KTCHERGAFA MGGMAAQIPV KGDEAANEAA FNKVRADKER
EANNGHDGTW VAHPDLVKVA MEIFGKLEGP NQLARQRQDV NVGQKELLQP HKGERTEHGM
RECCRVGVQY IEAWIGGRGA VPLYNLMEDA ATAEISRTQI WQWIYHGATL SDGRKVTPEL
FRDVLEDEMK SLRETLGETR WNEGHFEQAI GLFSEMTTAR ECEEFLTLPA YRLILENETR
P
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