| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0564 |
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| Symbol | |
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| ID | 5456502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 620376 |
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| End bp | 622898 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876133 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001411844 |
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| Protein GI | 154251020 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAG AAACGGAAAA CGGCGCCACG AAGGCGCTCC GCCTGCACCG GGACCTGGAC
GCGATATGGG GCACGGCGCC GGGGCTCGCG CAATTTGCCG TCGTGAACCA CAGCTCGATC
GGCCGCCGCT TCATGATAAC GGCGGCGGTG TTTTTCGCGA TCGGCGGCGT GCTCGCGATG
CTGATCCGCA CGCAGCTCGC TTCCGCCGAA AGCGTGTTCA TGGATGAAGG CCTTTATGCG
CAGGTCTTCA CCATGCATGG CACGATCATG ATGTTCCTCT TCGCGATACC GCTGATCGAG
GGCTTCGCGA TCTATCTTCT GCCGAAACTC CTCGGCGCGC GCGACCTCGC CTTTCCGCGC
CTCACCGCCT ATGGCTACTG GTGTTATCTC TTCGGCGGCA CGATGCTGAT CGTGGCGCTG
GCGGCGGGGG TTGCGCCCGA TGCCGGCTGG TTCATGTATA CGCCGCTTTC CTCCGGGACC
TATTCGCCCG GCATCAATTC GGATTTCTGG CTGCTCGGCG TCACCTTCGT CGAAATTTCC
GCCGTCTGCG CGGCCGTCGA AATCATCGTC AGCATATTGA AGCTGCGCGC CCCCGGCATG
TCGCTCGGCC GGATGCCGAT TTTCGCGTGG TACATGCTGG CGGTAGCGGC GATGATGCTG
TTCGCCTTTC CGCCGCTGAT CCTCGGCTCC ATCCTGCTCG AAGTGGAGCG CGCCTTCGGG
CTGCCCTTCT TCGACCCCGA ACGCGGCGGC GATCCGTTGC TGTGGCAGCA CCTTTTCTGG
CTCTTCGGCC ATCCGGAGGT CTACATCATC TTCCTGCCGG CGGCGGGCGC GATCTCCACC
ATCCTGCCGG TCTTTGCCGG CCGGCCGCTG ATGGGCTATC GCGCGGTGGT GCTGGCGGCG
ATCTCGATGG CCTTCATCTC CTTCGGCCTC TGGGTCCATC ACATGTACAT GGTGGGCATA
TCGCATATGG CGATGGCGTT TTTCTCGGCG GCGAGCGCGC TTGTCGCCGT GCCGACGGCG
ATCCAGATTT TCGCCTGGCT GGCGACGCTG GCGCATGGCC GCCCGCGCTT CAGCGTGCCG
ATGCTTTATG TCTTCGGATT TTTCTTCGTC TTCGTGATCG GCGGGTTGAC CGGCGTGATG
CTCGCCATGA TGCCCTTCGA CAAGCAGGCG CACGACACGC ATTTCGTGGT GGCGCATTTC
CATTATGTGC TGATCGGCGG CTTCGTCTTC CCGATGCTGG CGGCGGCCTA TTACTGGCTG
CCGCTGATGT CGGGAAAGCG GCCCGTGCAT CACCTCTCGC GGCCCGCCTT CTGGCTGGTC
TTTATCGGCT TCAATGTGAC CTTTCTCGTG ATGCACCTGA CGGGGCTGCT CGGAATGGTG
CGGCGCGTGC ATACCTATAC GGAAGCCTCG GGGCTGGAGA TCTACAATCT CATTTCCTCC
GTCGGCAGCT TCATCATGAT GTTCGGCTTC GCGCTGGTGC TGATCGATTT CATCCTGCAG
TTCCGCTATG GCCGCGCCTT CCCGCGCAAT CCGTGGAAGG CGATGACCCT CGAATGGGCG
ATGCCGAAAC CGGCGCCTGC CTACAACTTC GCGTCGCTGC CGCATGTGGA CCGCCGCGCC
GACATGCTGG AGCCGGAACG GCTGGGCCGG GAGCTTGCGA CGGGAGAGGG CTATCTCGGC
TTTGCGCGGG AGGGGCAAAT GGAGACGCTC GCCGTCGGCA TGGGGAGCGG GCGGCTCGAA
CAGGTGGTGC TGCTGCCGCG CCAGACATTC ATGCCGCTTT TCACGGCCGC CGCCACCGGC
CTCTTCTTCG TCGCGATGCT GGCGAAGCTC TATTGGCTGG TGCCCATCGC GCTGCTGGCG
ACGCTGGCGA TGTTTCTCGG CTGGACGCAT GCGACGGGGA GCGAGAAGGA CAGCGGCGCC
TTGCCCGTCG GACGCGATGC GGCGGCGCCG CCTCACACCG AGAGCCGCGG CGCCCCTTCA
TGGTGGGCGA TGGTGCTGAC GCTGGCCGCG GACGCGACGC TTTATGCATC GCTTCTTTTC
GGCGGCTGGT TCCTCTGGCT GTCGGCGCCG AACTGGCCGC CCGCGACGCT TCCCGAACCC
GACATGCTCC TTTCCGCCGT TGCGATTGCC GCGCTGCTGC TCGCGGGCGT CGCGGGGTGG
CGGGCGAGAG GGCTGGCAGG CGCGCGCCCG CAAACCTGGC TCATTGTCTG TGCCGCCGCA
CACGCGCTTG CGACGCTCGC CATTGCATGG ATCGCGATGG CCGGCATTCC CGACCGGATG
GGGCACGCCC TTTCAGCGAC ATGTTTCACG GTGCTTTGTT ATGCGGGCTT CCATACCGCG
CTTGGCGTGG TCTTCGCGCT GTTCGGTTTC TGGCGCGAGC GGCAGGGCCT CGTCTCGGCG
GCGCGGAGCC TCGATCTCAG GATCGGAAAA TTGTGGCACC TCTATACGGC GGGCGCGGGC
ATCGTCGCCG TCATCTTCGT GCATCTCTTC ATCATGCTCG GCTCCGGCGG AGGCGCATCA
TGA
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| Protein sequence | MSGETENGAT KALRLHRDLD AIWGTAPGLA QFAVVNHSSI GRRFMITAAV FFAIGGVLAM
LIRTQLASAE SVFMDEGLYA QVFTMHGTIM MFLFAIPLIE GFAIYLLPKL LGARDLAFPR
LTAYGYWCYL FGGTMLIVAL AAGVAPDAGW FMYTPLSSGT YSPGINSDFW LLGVTFVEIS
AVCAAVEIIV SILKLRAPGM SLGRMPIFAW YMLAVAAMML FAFPPLILGS ILLEVERAFG
LPFFDPERGG DPLLWQHLFW LFGHPEVYII FLPAAGAIST ILPVFAGRPL MGYRAVVLAA
ISMAFISFGL WVHHMYMVGI SHMAMAFFSA ASALVAVPTA IQIFAWLATL AHGRPRFSVP
MLYVFGFFFV FVIGGLTGVM LAMMPFDKQA HDTHFVVAHF HYVLIGGFVF PMLAAAYYWL
PLMSGKRPVH HLSRPAFWLV FIGFNVTFLV MHLTGLLGMV RRVHTYTEAS GLEIYNLISS
VGSFIMMFGF ALVLIDFILQ FRYGRAFPRN PWKAMTLEWA MPKPAPAYNF ASLPHVDRRA
DMLEPERLGR ELATGEGYLG FAREGQMETL AVGMGSGRLE QVVLLPRQTF MPLFTAAATG
LFFVAMLAKL YWLVPIALLA TLAMFLGWTH ATGSEKDSGA LPVGRDAAAP PHTESRGAPS
WWAMVLTLAA DATLYASLLF GGWFLWLSAP NWPPATLPEP DMLLSAVAIA ALLLAGVAGW
RARGLAGARP QTWLIVCAAA HALATLAIAW IAMAGIPDRM GHALSATCFT VLCYAGFHTA
LGVVFALFGF WRERQGLVSA ARSLDLRIGK LWHLYTAGAG IVAVIFVHLF IMLGSGGGAS
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